RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 C20orf78Q9BR46 151 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 SMDT1Q9H4I9 107 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 PKIGQ9Y2B9 76 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 COX7A2LO14548 114 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 CKS2P33552 79 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
VPS41-201ENST00000265745 TMEM18Q96B42 140 aa6.07□□□□□ -1.44
VPS41-201ENST00000265745 XP32Q5T750 250 aa6.06□□□□□ -1.44
VPS41-201ENST00000265745 Q6ZUT4 128 aa6.06□□□□□ -1.44
VPS41-201ENST00000265745 FAM104AQ969W3 186 aa6.06□□□□□ -1.44
VPS41-201ENST00000265745 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
VPS41-201ENST00000265745 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 TCAPO15273 167 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 HBBP68871 147 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 GAGE2BQ13066 116 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
VPS41-201ENST00000265745 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 C2orf48Q96LS8 159 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
VPS41-201ENST00000265745 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 D6R8Y8 96 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 F8W036 122 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 APOMO95445 188 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 PPBPP02775 128 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 S100A8P05109 93 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 RPL39P62891 51 aaKnown RBP6.04□□□□□ -1.44
VPS41-201ENST00000265745 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS41-201ENST00000265745 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 SMIM2Q9BVW6 85 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 SPANXA1Q9NS26 97 aa6.04□□□□□ -1.44
VPS41-201ENST00000265745 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
VPS41-201ENST00000265745 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
VPS41-201ENST00000265745 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
VPS41-201ENST00000265745 NPYP01303 97 aa6.03□□□□□ -1.44
VPS41-201ENST00000265745 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
VPS41-201ENST00000265745 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
VPS41-201ENST00000265745 Q6ZRP5 223 aa6.03□□□□□ -1.44
VPS41-201ENST00000265745 OPRPNQ99935 248 aaPredicted RBP6.03□□□□□ -1.44
VPS41-201ENST00000265745 SPAG11BQ08648 103 aa6.02□□□□□ -1.45
VPS41-201ENST00000265745 TMEM136Q6ZRR5 245 aa6.02□□□□□ -1.45
VPS41-201ENST00000265745 C9orf116Q5BN46 136 aaPredicted RBP6.01□□□□□ -1.45
VPS41-201ENST00000265745 ATP5L2Q7Z4Y8 100 aa6.01□□□□□ -1.45
VPS41-201ENST00000265745 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
VPS41-201ENST00000265745 OR10D4PQ8NGN7 298 aa6.01□□□□□ -1.45
VPS41-201ENST00000265745 TNXBP22105 4242 aa6□□□□□ -1.45
VPS41-201ENST00000265745 A0A0J9YXV3 536 aa6□□□□□ -1.45
VPS41-201ENST00000265745 F8WDY8 70 aa6□□□□□ -1.45
VPS41-201ENST00000265745 RAB5AP20339 215 aa6□□□□□ -1.45
VPS41-201ENST00000265745 KRTAP10-8P60410 259 aa6□□□□□ -1.45
VPS41-201ENST00000265745 PRELID3AQ96N28 172 aa6□□□□□ -1.45
VPS41-201ENST00000265745 MRPL35Q9NZE8 188 aaKnown RBP6□□□□□ -1.45
VPS41-201ENST00000265745 PYGO1Q9Y3Y4 419 aa6□□□□□ -1.45
VPS41-201ENST00000265745 IFITM10A6NMD0 228 aa5.99□□□□□ -1.45
VPS41-201ENST00000265745 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
VPS41-201ENST00000265745 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
VPS41-201ENST00000265745 REG3GQ6UW15 175 aa5.99□□□□□ -1.45
VPS41-201ENST00000265745 ORAOV1Q8WV07 137 aa5.99□□□□□ -1.45
VPS41-201ENST00000265745 A0A087WZ39 114 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 IFI27P40305 119 aaPredicted RBP5.98□□□□□ -1.45
VPS41-201ENST00000265745 LINC00242Q5T6M2 205 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 IMMP2LQ96T52 175 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 LAMTOR2Q9Y2Q5 125 aa5.98□□□□□ -1.45
VPS41-201ENST00000265745 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 LOC389332A0A1B0GUA5 103 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 NDUFA1O15239 70 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 MT-ND4LP03901 98 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 PNRC1Q12796 327 aaPredicted RBP5.97□□□□□ -1.45
VPS41-201ENST00000265745 KIAA0087Q14695 138 aa5.97□□□□□ -1.45
VPS41-201ENST00000265745 PHF5AQ7RTV0 110 aaKnown RBP5.97□□□□□ -1.45
VPS41-201ENST00000265745 TGIF2-C20orf24A0A0A6YYL0 155 aa5.96□□□□□ -1.46
VPS41-201ENST00000265745 MT-ND6P03923 174 aa5.96□□□□□ -1.46
VPS41-201ENST00000265745 TMEM141Q96I45 108 aa5.96□□□□□ -1.46
VPS41-201ENST00000265745 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.46
VPS41-201ENST00000265745 C6orf48Q9UBA6 75 aa5.96□□□□□ -1.46
VPS41-201ENST00000265745 FAM168BA1KXE4 195 aa5.95□□□□□ -1.46
VPS41-201ENST00000265745 UBE2D1P51668 147 aa5.95□□□□□ -1.46
VPS41-201ENST00000265745 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
VPS41-201ENST00000265745 Q8N8P6 123 aa5.95□□□□□ -1.46
VPS41-201ENST00000265745 IGIPA6NJ69 53 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 RAB14P61106 215 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 GAGE2EQ4V326 116 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 C2orf82Q6UX34 121 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 C2orf66Q6UXQ4 117 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 TEX43Q6ZNM6 134 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 LINC01561Q8N1V8 128 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 AMELXQ99217 191 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 VCX2Q9H322 139 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 GAGE2DQ9UEU5 116 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 CYSLTR1Q9Y271 337 aa5.94□□□□□ -1.46
VPS41-201ENST00000265745 LRP2P98164 4655 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms