RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 J3KT08 172 aa19.24■□□□□ 0.67
SMARCD3-201ENST00000262188 LOC107984156A0A0G2JMH3 177 aa19.24■□□□□ 0.67
SMARCD3-201ENST00000262188 K7EQD1 137 aa19.24■□□□□ 0.67
SMARCD3-201ENST00000262188 ARL17AQ8IVW1 177 aa19.24■□□□□ 0.67
SMARCD3-201ENST00000262188 VSIG2Q96IQ7 327 aa19.24■□□□□ 0.67
SMARCD3-201ENST00000262188 LINC01549A6NIU2 74 aa19.23■□□□□ 0.67
SMARCD3-201ENST00000262188 DEFB104AQ8WTQ1 72 aa19.23■□□□□ 0.67
SMARCD3-201ENST00000262188 RPL13AP40429 203 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-201ENST00000262188 NRACQ8N912 160 aa19.23■□□□□ 0.67
SMARCD3-201ENST00000262188 OR13C6PQ8NH95 151 aa19.22■□□□□ 0.67
SMARCD3-201ENST00000262188 PRO0255Q9UI72 69 aa19.22■□□□□ 0.67
SMARCD3-201ENST00000262188 DNAH7Q8WXX0 4024 aa19.21■□□□□ 0.67
SMARCD3-201ENST00000262188 NEXN-AS1Q8NBZ9 246 aa19.21■□□□□ 0.67
SMARCD3-201ENST00000262188 TRBV6-4A0A1B0GX49 114 aa19.2■□□□□ 0.66
SMARCD3-201ENST00000262188 K7EMI3 77 aa19.2■□□□□ 0.66
SMARCD3-201ENST00000262188 PAX4O43316 350 aa19.2■□□□□ 0.66
SMARCD3-201ENST00000262188 TCL1BO95988 128 aa19.2■□□□□ 0.66
SMARCD3-201ENST00000262188 TRAV12-1A0A0B4J245 112 aa19.19■□□□□ 0.66
SMARCD3-201ENST00000262188 TNFRSF6BO95407 300 aa19.19■□□□□ 0.66
SMARCD3-201ENST00000262188 TRAV10A0A0B4J240 114 aa19.18■□□□□ 0.66
SMARCD3-201ENST00000262188 SLC25A20O43772 301 aa19.18■□□□□ 0.66
SMARCD3-201ENST00000262188 GYPEP15421 78 aa19.18■□□□□ 0.66
SMARCD3-201ENST00000262188 CSMD3Q7Z407 3707 aa19.18■□□□□ 0.66
SMARCD3-201ENST00000262188 RHOHQ15669 191 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 ZNRF2Q8NHG8 242 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 A0A096LPF7 62 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 TRAV8-4A0A0B4J246 113 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 TRBV7-7A0A0K0K1E9 115 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 IMUPQ9GZP8 106 aa19.17■□□□□ 0.66
SMARCD3-201ENST00000262188 FAM240AA0A1B0GVK7 77 aa19.16■□□□□ 0.66
SMARCD3-201ENST00000262188 A4D1N5 150 aa19.16■□□□□ 0.66
SMARCD3-201ENST00000262188 C15orf53Q8NAA6 179 aa19.16■□□□□ 0.66
SMARCD3-201ENST00000262188 H7C1H1 209 aa19.15■□□□□ 0.66
SMARCD3-201ENST00000262188 PRADC1Q9BSG0 188 aa19.15■□□□□ 0.66
SMARCD3-201ENST00000262188 IGHV3-38A0A0C4DH36 116 aa19.15■□□□□ 0.66
SMARCD3-201ENST00000262188 MRPL35Q9NZE8 188 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-201ENST00000262188 Q8N8P6 123 aa19.13■□□□□ 0.65
SMARCD3-201ENST00000262188 LINC00694P0DN24 101 aa19.12■□□□□ 0.65
SMARCD3-201ENST00000262188 BAALCQ8WXS3 180 aa19.12■□□□□ 0.65
SMARCD3-201ENST00000262188 SDHAF1A6NFY7 115 aa19.11■□□□□ 0.65
SMARCD3-201ENST00000262188 STARD9Q9P2P6 4700 aa19.11■□□□□ 0.65
SMARCD3-201ENST00000262188 TRBV10-1A0A0K0K1A3 114 aa19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 C9JAW5 83 aa19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 SUMO2P61956 95 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 RPL36AP83881 106 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 RPL36ALQ969Q0 106 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 F8VRH5 84 aa19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 C10orf126Q8N4M7 172 aa19.1■□□□□ 0.65
SMARCD3-201ENST00000262188 TRBV6-5A0A0K0K1A5 114 aa19.08■□□□□ 0.64
SMARCD3-201ENST00000262188 C3orf22Q8N5N4 141 aa19.08■□□□□ 0.64
SMARCD3-201ENST00000262188 UQCRQO14949 82 aa19.07■□□□□ 0.64
SMARCD3-201ENST00000262188 POLR2KP53803 58 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-201ENST00000262188 FAM19A5Q7Z5A7 132 aaPredicted RBP19.06■□□□□ 0.64
SMARCD3-201ENST00000262188 DYNC2H1Q8NCM8 4307 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-201ENST00000262188 SRSF9Q13242 221 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMARCD3-201ENST00000262188 TMEM101Q96IK0 257 aa19.05■□□□□ 0.64
SMARCD3-201ENST00000262188 SMIM2Q9BVW6 85 aa19.05■□□□□ 0.64
SMARCD3-201ENST00000262188 ICOSQ9Y6W8 199 aa19.05■□□□□ 0.64
SMARCD3-201ENST00000262188 CEMP1Q6PRD7 247 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-201ENST00000262188 LINC00526Q96FQ7 95 aa19.04■□□□□ 0.64
SMARCD3-201ENST00000262188 PPP1R17O96001 155 aa19.04■□□□□ 0.64
SMARCD3-201ENST00000262188 C9orf153Q5TBE3 101 aa19.03■□□□□ 0.64
SMARCD3-201ENST00000262188 IGLV2-18A0A075B6J9 118 aa19.02■□□□□ 0.64
SMARCD3-201ENST00000262188 PRO1854Q9UHT4 67 aa19.02■□□□□ 0.64
SMARCD3-201ENST00000262188 PLECQ15149 4684 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-201ENST00000262188 LAGE3Q14657 143 aa19.01■□□□□ 0.63
SMARCD3-201ENST00000262188 WWC2-AS2Q96NR7 200 aa19.01■□□□□ 0.63
SMARCD3-201ENST00000262188 TRBV27A0A0K0K1C4 114 aa19■□□□□ 0.63
SMARCD3-201ENST00000262188 H3BNG1 76 aa19■□□□□ 0.63
SMARCD3-201ENST00000262188 ATXN8Q156A1 80 aa19■□□□□ 0.63
SMARCD3-201ENST00000262188 NTN5Q8WTR8 489 aaPredicted RBP19■□□□□ 0.63
SMARCD3-201ENST00000262188 MUC7Q8TAX7 377 aa18.99■□□□□ 0.63
SMARCD3-201ENST00000262188 I3L3M4 83 aa18.99■□□□□ 0.63
SMARCD3-201ENST00000262188 VCYO14598 125 aa18.99■□□□□ 0.63
SMARCD3-201ENST00000262188 TSHBP01222 138 aa18.99■□□□□ 0.63
SMARCD3-201ENST00000262188 NTM-AS1Q6ZSK4 140 aa18.99■□□□□ 0.63
SMARCD3-201ENST00000262188 HERVK_113P63121 156 aa18.98■□□□□ 0.63
SMARCD3-201ENST00000262188 SCGB1D4Q6XE38 83 aa18.98■□□□□ 0.63
SMARCD3-201ENST00000262188 UBE2WQ96B02 151 aa18.98■□□□□ 0.63
SMARCD3-201ENST00000262188 CHCHD5Q9BSY4 110 aa18.98■□□□□ 0.63
SMARCD3-201ENST00000262188 LYSTQ99698 3801 aa18.98■□□□□ 0.63
SMARCD3-201ENST00000262188 TRBV10-2A0A0K0K1G8 114 aa18.97■□□□□ 0.63
SMARCD3-201ENST00000262188 ZNF815PA8K554 130 aa18.97■□□□□ 0.63
SMARCD3-201ENST00000262188 NUPR2A6NF83 97 aa18.97■□□□□ 0.63
SMARCD3-201ENST00000262188 DAZ4Q86SG3 579 aaKnown RBP18.97■□□□□ 0.63
SMARCD3-201ENST00000262188 DAZ3Q9NR90 486 aaKnown RBP18.97■□□□□ 0.63
SMARCD3-201ENST00000262188 ACYP1P07311 99 aa18.95■□□□□ 0.62
SMARCD3-201ENST00000262188 TMEM170BQ5T4T1 132 aa18.95■□□□□ 0.62
SMARCD3-201ENST00000262188 CFC1BP0CG36 223 aa18.95■□□□□ 0.62
SMARCD3-201ENST00000262188 CFC1P0CG37 223 aa18.95■□□□□ 0.62
SMARCD3-201ENST00000262188 TENM2Q9NT68 2774 aa18.94■□□□□ 0.62
SMARCD3-201ENST00000262188 ESRGQ1W209 222 aa18.93■□□□□ 0.62
SMARCD3-201ENST00000262188 LINC01620Q4KN68 170 aa18.93■□□□□ 0.62
SMARCD3-201ENST00000262188 APLNQ9ULZ1 77 aa18.93■□□□□ 0.62
SMARCD3-201ENST00000262188 LYPD5Q6UWN5 251 aa18.93■□□□□ 0.62
SMARCD3-201ENST00000262188 H3BT86 120 aa18.92■□□□□ 0.62
SMARCD3-201ENST00000262188 PAPPA-AS1Q5QFB9 102 aa18.92■□□□□ 0.62
SMARCD3-201ENST00000262188 KLK5Q9Y337 293 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-201ENST00000262188 LOC107984640A0A0U1RRK4 108 aa18.91■□□□□ 0.62
SMARCD3-201ENST00000262188 A0A0B4J2C4 111 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms