RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TNCP24821 2201 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 H3BUA1 57 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 SPINK13Q1W4C9 94 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 NPBQ8NG41 125 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 TRBV6-4A0A1B0GX49 114 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 FSTL3O95633 263 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 C10orf25Q5T742 122 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 MUC7Q8TAX7 377 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 K7EIM0 57 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 CCL18P55774 89 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV4-38-2P0DP08 117 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 A0A1B0GW54 56 aa4.82□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV6-1A0A0B4J1U7 121 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 MSMPQ1L6U9 139 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 Q8N2B8 174 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 A0A1B0GU69 56 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 TSHBP01222 138 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 FAM218AQ96MZ4 157 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 Q6ZTI0 123 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 C1orf134Q5TEV5 83 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 LINC00574Q9H8X3 128 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 DEFB113Q30KQ7 82 aa4.81□□□□□ -1.64
PDGFRA-201ENST00000257290 CACNA1EQ15878 2313 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 M0QY20 66 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 Q75L30 129 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 SDK2Q58EX2 2172 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 C16orf90A8MZG2 172 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV3OR16-9A0A0B4J2B5 98 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 FER1L5A0AVI2 2057 aa4.8□□□□□ -1.64
PDGFRA-201ENST00000257290 KIAA0087Q14695 138 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 LINC00575Q6W349 94 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 Q6ZQT0 140 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 IGLV2-23P01705 113 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 Q6ZRP5 223 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 CUL9Q8IWT3 2517 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 SORL1Q92673 2214 aa4.79□□□□□ -1.64
PDGFRA-201ENST00000257290 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 COA5Q86WW8 74 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 K7EQD1 137 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 AHCTF1Q8WYP5 2266 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 IGLV1-47P01700 117 aa4.78□□□□□ -1.64
PDGFRA-201ENST00000257290 G3V318 75 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 AMELXQ99217 191 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 PTPRZ1P23471 2315 aaPredicted RBP4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 CGB3P0DN86 165 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 CGB7P0DN87 165 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 LINC00337Q8N6G1 96 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 TPRP12270 2363 aaKnown RBP4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
PDGFRA-201ENST00000257290 CTSGP08311 255 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 ODF3BA8MYP8 253 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 ZFP36P26651 326 aaKnown RBP4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 MAPK1IP1LQ8NDC0 245 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 SPATA3Q8NHX4 192 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 IGLV11-55A0A075B6I3 123 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 PCNX3Q9H6A9 2034 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 USF3Q68DE3 2245 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 C11orf71Q6IPW1 123 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 ZFAND2AQ8N6M9 145 aa4.76□□□□□ -1.65
PDGFRA-201ENST00000257290 ZNF702PQ9H963 129 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 IGHV7-81A0A0B4J1V7 117 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 SMIM1B2RUZ4 78 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 Q5VV11 94 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 EPM2AB3EWF7 344 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 HTN3P15516 51 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 C11orf72Q8NBR9 251 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 UQCR11O14957 56 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 C5orf56Q8N8D9 126 aa4.75□□□□□ -1.65
PDGFRA-201ENST00000257290 EIF4EBP3O60516 100 aaPredicted RBP4.74□□□□□ -1.65
PDGFRA-201ENST00000257290 REG3GQ6UW15 175 aa4.74□□□□□ -1.65
PDGFRA-201ENST00000257290 ASB16-AS1Q495Z4 193 aa4.74□□□□□ -1.65
PDGFRA-201ENST00000257290 Q8N9W7 124 aa4.74□□□□□ -1.65
PDGFRA-201ENST00000257290 C9orf66Q5T8R8 295 aa4.74□□□□□ -1.65
PDGFRA-201ENST00000257290 COX17Q14061 63 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 PLXNB1O43157 2135 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 DEFB114Q30KQ6 69 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 LITAFQ99732 161 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 LINC00242Q5T6M2 205 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 DEFB131AP59861 70 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 LMO4P61968 165 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 CEP250Q9BV73 2442 aa4.73□□□□□ -1.65
PDGFRA-201ENST00000257290 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 MOBPQ13875 183 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 SPANXA2-OT1Q8N9U9 137 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 SPTBN1Q01082 2364 aaKnown RBP4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms