RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-231ENST00000641939 ANAPC16Q96DE5 110 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
PHGDH-231ENST00000641939 IFITM2Q01629 132 aa9.74□□□□□ -0.85
PHGDH-231ENST00000641939 D6R8Y8 96 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 TNFRSF6BO95407 300 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
PHGDH-231ENST00000641939 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 C9orf163Q8N9P6 203 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
PHGDH-231ENST00000641939 PPBPP02775 128 aa9.72□□□□□ -0.85
PHGDH-231ENST00000641939 CNBPP62633 177 aaKnown RBP9.72□□□□□ -0.85
PHGDH-231ENST00000641939 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
PHGDH-231ENST00000641939 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
PHGDH-231ENST00000641939 UQCC3Q6UW78 93 aa9.72□□□□□ -0.85
PHGDH-231ENST00000641939 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
PHGDH-231ENST00000641939 FLG2Q5D862 2391 aaPredicted RBP9.71□□□□□ -0.85
PHGDH-231ENST00000641939 LINC00959A0A1B0GUT2 108 aa9.71□□□□□ -0.86
PHGDH-231ENST00000641939 TCAPO15273 167 aa9.71□□□□□ -0.86
PHGDH-231ENST00000641939 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
PHGDH-231ENST00000641939 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
PHGDH-231ENST00000641939 C15orf56Q8N910 161 aa9.71□□□□□ -0.86
PHGDH-231ENST00000641939 PHOX2AO14813 284 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 FOXI1Q12951 378 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 ORMDL3Q8N138 153 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
PHGDH-231ENST00000641939 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
PHGDH-231ENST00000641939 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-231ENST00000641939 CCL25O15444 150 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 NPYP01303 97 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 XCL1P47992 114 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 SS18Q15532 418 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 CIRBP-AS1Q8TBR5 109 aa9.69□□□□□ -0.86
PHGDH-231ENST00000641939 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 SLPIP03973 132 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 ADCYAP1P18509 176 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
PHGDH-231ENST00000641939 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
PHGDH-231ENST00000641939 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
PHGDH-231ENST00000641939 PLA2G1BP04054 148 aaKnown RBP9.66□□□□□ -0.86
PHGDH-231ENST00000641939 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
PHGDH-231ENST00000641939 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
PHGDH-231ENST00000641939 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-231ENST00000641939 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 RPL39P62891 51 aaKnown RBP9.65□□□□□ -0.86
PHGDH-231ENST00000641939 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
PHGDH-231ENST00000641939 Q6ZUT4 128 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 IMMP2LQ96T52 175 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 SEC11CQ9BY50 192 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
PHGDH-231ENST00000641939 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-231ENST00000641939 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
PHGDH-231ENST00000641939 RAB5AP20339 215 aa9.64□□□□□ -0.87
PHGDH-231ENST00000641939 CTDSP1Q9GZU7 261 aa9.64□□□□□ -0.87
PHGDH-231ENST00000641939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-231ENST00000641939 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
PHGDH-231ENST00000641939 PRSS47A8MTI9 375 aa9.63□□□□□ -0.87
PHGDH-231ENST00000641939 PANO1I0J062 215 aa9.63□□□□□ -0.87
PHGDH-231ENST00000641939 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
PHGDH-231ENST00000641939 MAP1LC3AQ9H492 121 aa9.62□□□□□ -0.87
PHGDH-231ENST00000641939 LOC389332A0A1B0GUA5 103 aa9.61□□□□□ -0.87
PHGDH-231ENST00000641939 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
PHGDH-231ENST00000641939 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
PHGDH-231ENST00000641939 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
PHGDH-231ENST00000641939 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
PHGDH-231ENST00000641939 COX7A2LO14548 114 aa9.6□□□□□ -0.87
PHGDH-231ENST00000641939 MALP21145 153 aa9.6□□□□□ -0.87
PHGDH-231ENST00000641939 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
PHGDH-231ENST00000641939 COX6A2Q02221 97 aa9.59□□□□□ -0.87
PHGDH-231ENST00000641939 Q8N8P6 123 aa9.59□□□□□ -0.87
PHGDH-231ENST00000641939 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
PHGDH-231ENST00000641939 DPH3Q96FX2 82 aa9.59□□□□□ -0.87
PHGDH-231ENST00000641939 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-231ENST00000641939 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
PHGDH-231ENST00000641939 S100PP25815 95 aa9.58□□□□□ -0.88
PHGDH-231ENST00000641939 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-231ENST00000641939 C10orf91Q5T1B1 145 aa9.58□□□□□ -0.88
PHGDH-231ENST00000641939 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
PHGDH-231ENST00000641939 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
PHGDH-231ENST00000641939 KRTAP10-4P60372 401 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-231ENST00000641939 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
PHGDH-231ENST00000641939 PRSS3P2Q8NHM4 247 aa9.57□□□□□ -0.88
PHGDH-231ENST00000641939 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
PHGDH-231ENST00000641939 A0A087WYN8 130 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 IFITM10A6NMD0 228 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 K7EMI3 77 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 APOMO95445 188 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
PHGDH-231ENST00000641939 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
PHGDH-231ENST00000641939 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms