RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PRAC2D3DTV9 90 aa6.22□□□□□ -1.41
NECAP1-227ENST00000640648 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
NECAP1-227ENST00000640648 NAV2Q8IVL1 2488 aa6.21□□□□□ -1.41
NECAP1-227ENST00000640648 TRBV10-1A0A0K0K1A3 114 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 IGLV11-55A0A075B6I3 123 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 A0A1B0GW54 56 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 CTSGP08311 255 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 NUP210LQ5VU65 1888 aa6.21□□□□□ -1.42
NECAP1-227ENST00000640648 DEFB1P60022 68 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 CFHR3Q02985 330 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 IGHV7-81A0A0B4J1V7 117 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 IGFL2Q6UWQ7 119 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 MSMBP08118 114 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 Q9HAA7 133 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 ARHGAP32A7KAX9 2087 aa6.2□□□□□ -1.42
NECAP1-227ENST00000640648 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
NECAP1-227ENST00000640648 RPL39P62891 51 aaKnown RBP6.19□□□□□ -1.42
NECAP1-227ENST00000640648 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
NECAP1-227ENST00000640648 IGLV1-47P01700 117 aa6.19□□□□□ -1.42
NECAP1-227ENST00000640648 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
NECAP1-227ENST00000640648 CGB3P0DN86 165 aa6.19□□□□□ -1.42
NECAP1-227ENST00000640648 CGB7P0DN87 165 aa6.19□□□□□ -1.42
NECAP1-227ENST00000640648 CRIP2P52943 208 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-227ENST00000640648 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 CRIP1P50238 77 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 DAZAP2Q15038 168 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-227ENST00000640648 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 Q8N6K4 173 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 EML5Q05BV3 1969 aa6.18□□□□□ -1.42
NECAP1-227ENST00000640648 USP9XQ93008 2570 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-227ENST00000640648 RNF223E7ERA6 249 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 IGLV2-18A0A075B6J9 118 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 USP9YO00507 2555 aaPredicted RBP6.17□□□□□ -1.42
NECAP1-227ENST00000640648 K7EMT4 169 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 OXLD1Q5BKU9 147 aa6.17□□□□□ -1.42
NECAP1-227ENST00000640648 Q6ZS46 218 aa6.16□□□□□ -1.42
NECAP1-227ENST00000640648 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
NECAP1-227ENST00000640648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
NECAP1-227ENST00000640648 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
NECAP1-227ENST00000640648 Q8N9W7 124 aa6.16□□□□□ -1.42
NECAP1-227ENST00000640648 HTTP42858 3142 aa6.16□□□□□ -1.42
NECAP1-227ENST00000640648 A8MZ25 164 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 H3BPC8 53 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 BRCA2P51587 3418 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 NCR3O14931 201 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 DSCR9P59020 149 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 LINC00336Q6ZUF6 198 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 LINC01356Q8N9X3 169 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 CELA1Q9UNI1 258 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 ANKRD11Q6UB99 2663 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-227ENST00000640648 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
NECAP1-227ENST00000640648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-227ENST00000640648 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-227ENST00000640648 COX7BP24311 80 aa6.15□□□□□ -1.43
NECAP1-227ENST00000640648 MUC22E2RYF6 1773 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-227ENST00000640648 COX17Q14061 63 aa6.14□□□□□ -1.43
NECAP1-227ENST00000640648 DEFB136Q30KP8 78 aa6.14□□□□□ -1.43
NECAP1-227ENST00000640648 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
NECAP1-227ENST00000640648 IGHV4-59P01825 116 aa6.14□□□□□ -1.43
NECAP1-227ENST00000640648 HIVEP2P31629 2446 aa6.14□□□□□ -1.43
NECAP1-227ENST00000640648 A0A087WZ39 114 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 IGHV4-38-2P0DP08 117 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
NECAP1-227ENST00000640648 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 ATP11AUNQ6ZP68 121 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 CCL24O00175 119 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 NTM-AS1Q6ZSK4 140 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 IGHV4-61A0A0C4DH41 118 aa6.13□□□□□ -1.43
NECAP1-227ENST00000640648 K7ERS5 55 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 C1orf158Q8N1D5 194 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 TNRC6BQ9UPQ9 1833 aaKnown RBP6.12□□□□□ -1.43
NECAP1-227ENST00000640648 DOPEY1Q5JWR5 2465 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 CEMP1Q6PRD7 247 aaPredicted RBP6.12□□□□□ -1.43
NECAP1-227ENST00000640648 Q6ZVQ6 151 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 ATG2AQ2TAZ0 1938 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 LCA10Q71F78 164 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 WFDC10AQ9H1F0 79 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 LINC00846Q9NV44 126 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 K7EQD1 137 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 DEFB112Q30KQ8 113 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 UNQ9165/PRO28630Q6UXU0 137 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 Q8N3U1 123 aa6.12□□□□□ -1.43
NECAP1-227ENST00000640648 M0QY20 66 aa6.11□□□□□ -1.43
NECAP1-227ENST00000640648 FSTL3O95633 263 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms