RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GCSHP23434 173 aa17.47■□□□□ 0.39
VEGFA-231ENST00000640499 CDC42SE2Q9NRR3 84 aa17.47■□□□□ 0.39
VEGFA-231ENST00000640499 IGKV3OR2-268A0A0C4DH90 116 aa17.46■□□□□ 0.39
VEGFA-231ENST00000640499 USP17L23D6RBM5 183 aa17.46■□□□□ 0.39
VEGFA-231ENST00000640499 TCAPO15273 167 aa17.46■□□□□ 0.39
VEGFA-231ENST00000640499 UBE2D4Q9Y2X8 147 aa17.46■□□□□ 0.39
VEGFA-231ENST00000640499 OR5A1Q8NGJ0 315 aa17.45■□□□□ 0.38
VEGFA-231ENST00000640499 APOC3P02656 99 aa17.44■□□□□ 0.38
VEGFA-231ENST00000640499 FAM104AQ969W3 186 aa17.44■□□□□ 0.38
VEGFA-231ENST00000640499 LAMTOR2Q9Y2Q5 125 aa17.44■□□□□ 0.38
VEGFA-231ENST00000640499 TMEM101Q96IK0 257 aa17.43■□□□□ 0.38
VEGFA-231ENST00000640499 CSDC2Q9Y534 153 aaKnown RBP17.43■□□□□ 0.38
VEGFA-231ENST00000640499 S100PP25815 95 aa17.42■□□□□ 0.38
VEGFA-231ENST00000640499 RPL39P62891 51 aaKnown RBP17.42■□□□□ 0.38
VEGFA-231ENST00000640499 KIAA1644Q3SXP7 199 aa17.42■□□□□ 0.38
VEGFA-231ENST00000640499 ZNF664Q8N3J9 261 aa17.42■□□□□ 0.38
VEGFA-231ENST00000640499 LOC389332A0A1B0GUA5 103 aa17.41■□□□□ 0.38
VEGFA-231ENST00000640499 PRSS1P07477 247 aa17.41■□□□□ 0.38
VEGFA-231ENST00000640499 XGP55808 180 aa17.41■□□□□ 0.38
VEGFA-231ENST00000640499 LINC00959A0A1B0GUT2 108 aa17.4■□□□□ 0.38
VEGFA-231ENST00000640499 GAGE12HA6NDE8 117 aa17.4■□□□□ 0.38
VEGFA-231ENST00000640499 CHCHD10Q8WYQ3 142 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-231ENST00000640499 TIMM21Q9BVV7 248 aa17.4■□□□□ 0.38
VEGFA-231ENST00000640499 LINC01620Q4KN68 170 aa17.39■□□□□ 0.37
VEGFA-231ENST00000640499 GNB1LQ9BYB4 327 aa17.39■□□□□ 0.37
VEGFA-231ENST00000640499 MAP1LC3AQ9H492 121 aa17.39■□□□□ 0.37
VEGFA-231ENST00000640499 SVBPQ8N300 66 aa17.38■□□□□ 0.37
VEGFA-231ENST00000640499 RNASE13Q5GAN3 156 aaKnown RBP17.37■□□□□ 0.37
VEGFA-231ENST00000640499 SLC7A5P1Q8MH63 180 aa17.37■□□□□ 0.37
VEGFA-231ENST00000640499 Q8N8P6 123 aa17.37■□□□□ 0.37
VEGFA-231ENST00000640499 FAM30AQ9NZY2 134 aa17.37■□□□□ 0.37
VEGFA-231ENST00000640499 TGIF2-C20orf24A0A0A6YYL0 155 aa17.36■□□□□ 0.37
VEGFA-231ENST00000640499 FOXI1Q12951 378 aa17.36■□□□□ 0.37
VEGFA-231ENST00000640499 C14orf177Q52M58 125 aa17.36■□□□□ 0.37
VEGFA-231ENST00000640499 DGAT2L7PQ6IED9 249 aa17.36■□□□□ 0.37
VEGFA-231ENST00000640499 Q6ZUT4 128 aa17.36■□□□□ 0.37
VEGFA-231ENST00000640499 SNAPINO95295 136 aa17.35■□□□□ 0.37
VEGFA-231ENST00000640499 TMEM18Q96B42 140 aa17.35■□□□□ 0.37
VEGFA-231ENST00000640499 OPRPNQ99935 248 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-231ENST00000640499 NDUFA5Q16718 116 aa17.34■□□□□ 0.37
VEGFA-231ENST00000640499 C15orf56Q8N910 161 aa17.34■□□□□ 0.37
VEGFA-231ENST00000640499 FAT1Q14517 4588 aa17.33■□□□□ 0.37
VEGFA-231ENST00000640499 ABCA13Q86UQ4 5058 aa17.33■□□□□ 0.37
VEGFA-231ENST00000640499 CCL25O15444 150 aa17.33■□□□□ 0.36
VEGFA-231ENST00000640499 RAB5AP20339 215 aa17.33■□□□□ 0.36
VEGFA-231ENST00000640499 SLPIP03973 132 aa17.32■□□□□ 0.36
VEGFA-231ENST00000640499 IFI27P40305 119 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-231ENST00000640499 XCL1P47992 114 aa17.32■□□□□ 0.36
VEGFA-231ENST00000640499 ALKBH7Q9BT30 221 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-231ENST00000640499 KRTAP4-5Q9BYR2 181 aa17.32■□□□□ 0.36
VEGFA-231ENST00000640499 PCLOQ9Y6V0 5065 aa17.32■□□□□ 0.36
VEGFA-231ENST00000640499 SMAGPQ0VAQ4 97 aa17.31■□□□□ 0.36
VEGFA-231ENST00000640499 COX19Q49B96 90 aa17.31■□□□□ 0.36
VEGFA-231ENST00000640499 YPEL4Q96NS1 127 aa17.31■□□□□ 0.36
VEGFA-231ENST00000640499 MRPL18Q9H0U6 180 aaKnown RBP17.31■□□□□ 0.36
VEGFA-231ENST00000640499 SPANXA1Q9NS26 97 aa17.31■□□□□ 0.36
VEGFA-231ENST00000640499 HAMPP81172 84 aa17.3■□□□□ 0.36
VEGFA-231ENST00000640499 Q6ZSA8 131 aa17.3■□□□□ 0.36
VEGFA-231ENST00000640499 SS18Q15532 418 aa17.29■□□□□ 0.36
VEGFA-231ENST00000640499 MRPS36P82909 103 aaKnown RBP17.28■□□□□ 0.36
VEGFA-231ENST00000640499 hDV102S1A0JD36 115 aa17.27■□□□□ 0.36
VEGFA-231ENST00000640499 CD164L2Q6UWJ8 174 aa17.27■□□□□ 0.36
VEGFA-231ENST00000640499 NXT2Q9NPJ8 142 aaKnown RBP17.27■□□□□ 0.36
VEGFA-231ENST00000640499 PYGO1Q9Y3Y4 419 aa17.27■□□□□ 0.36
VEGFA-231ENST00000640499 TRAV13-1A0A0B4J241 112 aa17.26■□□□□ 0.35
VEGFA-231ENST00000640499 MT-ND6P03923 174 aa17.26■□□□□ 0.35
VEGFA-231ENST00000640499 FABP9Q0Z7S8 132 aa17.26■□□□□ 0.35
VEGFA-231ENST00000640499 C1orf196B1AJZ1 125 aa17.25■□□□□ 0.35
VEGFA-231ENST00000640499 IGLV4-3A0A075B6K6 122 aa17.24■□□□□ 0.35
VEGFA-231ENST00000640499 K7EMI3 77 aa17.24■□□□□ 0.35
VEGFA-231ENST00000640499 CNBPP62633 177 aaKnown RBP17.24■□□□□ 0.35
VEGFA-231ENST00000640499 C2orf66Q6UXQ4 117 aa17.24■□□□□ 0.35
VEGFA-231ENST00000640499 C9orf163Q8N9P6 203 aa17.24■□□□□ 0.35
VEGFA-231ENST00000640499 HIGD2BQ4VC39 106 aa17.23■□□□□ 0.35
VEGFA-231ENST00000640499 ORMDL2Q53FV1 153 aa17.23■□□□□ 0.35
VEGFA-231ENST00000640499 CFAP161Q6P656 301 aa17.23■□□□□ 0.35
VEGFA-231ENST00000640499 Q8N1X5 172 aa17.23■□□□□ 0.35
VEGFA-231ENST00000640499 LINC01546A6NGU7 62 aa17.22■□□□□ 0.35
VEGFA-231ENST00000640499 GVQW2A0A096LPI5 108 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-231ENST00000640499 IGIPA6NJ69 53 aa17.21■□□□□ 0.35
VEGFA-231ENST00000640499 CYSLTR1Q9Y271 337 aa17.21■□□□□ 0.35
VEGFA-231ENST00000640499 TRAPPC1Q9Y5R8 145 aa17.21■□□□□ 0.35
VEGFA-231ENST00000640499 PRSS3P2Q8NHM4 247 aa17.19■□□□□ 0.34
VEGFA-231ENST00000640499 ZC2HC1BQ5TFG8 222 aa17.18■□□□□ 0.34
VEGFA-231ENST00000640499 SDIM1Q6ZPB5 146 aa17.18■□□□□ 0.34
VEGFA-231ENST00000640499 CBLN2Q8IUK8 224 aa17.18■□□□□ 0.34
VEGFA-231ENST00000640499 IGHV1-58A0A0C4DH39 117 aa17.17■□□□□ 0.34
VEGFA-231ENST00000640499 LINC00173Q6ZV60 143 aa17.17■□□□□ 0.34
VEGFA-231ENST00000640499 LINC00526Q96FQ7 95 aa17.17■□□□□ 0.34
VEGFA-231ENST00000640499 TMEM141Q96I45 108 aa17.17■□□□□ 0.34
VEGFA-231ENST00000640499 C5orf38Q86SI9 138 aa17.16■□□□□ 0.34
VEGFA-231ENST00000640499 URB1-AS1Q96HZ7 61 aa17.16■□□□□ 0.34
VEGFA-231ENST00000640499 AP5S1Q9NUS5 200 aa17.16■□□□□ 0.34
VEGFA-231ENST00000640499 IGHV3OR16-9A0A0B4J2B5 98 aa17.15■□□□□ 0.34
VEGFA-231ENST00000640499 IFITM10A6NMD0 228 aa17.15■□□□□ 0.34
VEGFA-231ENST00000640499 SMR3BP02814 79 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-231ENST00000640499 TOMM6Q96B49 74 aa17.15■□□□□ 0.34
VEGFA-231ENST00000640499 AMELXQ99217 191 aa17.15■□□□□ 0.34
VEGFA-231ENST00000640499 PANO1I0J062 215 aa17.14■□□□□ 0.33
VEGFA-231ENST00000640499 COX7A2LO14548 114 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms