RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
SPIN3-220ENST00000639257 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
SPIN3-220ENST00000639257 NPYP01303 97 aa11.59□□□□□ -0.55
SPIN3-220ENST00000639257 C10orf91Q5T1B1 145 aa11.59□□□□□ -0.55
SPIN3-220ENST00000639257 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
SPIN3-220ENST00000639257 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 TCAPO15273 167 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 FCER1GP30273 86 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 CNBPP62633 177 aaKnown RBP11.58□□□□□ -0.56
SPIN3-220ENST00000639257 LINC01620Q4KN68 170 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SPIN3-220ENST00000639257 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
SPIN3-220ENST00000639257 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
SPIN3-220ENST00000639257 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
SPIN3-220ENST00000639257 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
SPIN3-220ENST00000639257 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
SPIN3-220ENST00000639257 CTDSP1Q9GZU7 261 aa11.57□□□□□ -0.56
SPIN3-220ENST00000639257 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
SPIN3-220ENST00000639257 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
SPIN3-220ENST00000639257 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
SPIN3-220ENST00000639257 ZNF664Q8N3J9 261 aa11.56□□□□□ -0.56
SPIN3-220ENST00000639257 LAMTOR2Q9Y2Q5 125 aa11.56□□□□□ -0.56
SPIN3-220ENST00000639257 HAMPP81172 84 aa11.55□□□□□ -0.56
SPIN3-220ENST00000639257 FOXI1Q12951 378 aa11.55□□□□□ -0.56
SPIN3-220ENST00000639257 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
SPIN3-220ENST00000639257 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
SPIN3-220ENST00000639257 SLPIP03973 132 aa11.54□□□□□ -0.56
SPIN3-220ENST00000639257 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
SPIN3-220ENST00000639257 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
SPIN3-220ENST00000639257 IGKV3OR2-268A0A0C4DH90 116 aa11.53□□□□□ -0.56
SPIN3-220ENST00000639257 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
SPIN3-220ENST00000639257 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
SPIN3-220ENST00000639257 Q5VSD8 79 aa11.52□□□□□ -0.57
SPIN3-220ENST00000639257 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
SPIN3-220ENST00000639257 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
SPIN3-220ENST00000639257 CHAC1Q9BUX1 264 aa11.52□□□□□ -0.57
SPIN3-220ENST00000639257 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
SPIN3-220ENST00000639257 CCL25O15444 150 aa11.51□□□□□ -0.57
SPIN3-220ENST00000639257 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
SPIN3-220ENST00000639257 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
SPIN3-220ENST00000639257 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
SPIN3-220ENST00000639257 SMR3BP02814 79 aaPredicted RBP11.5□□□□□ -0.57
SPIN3-220ENST00000639257 RPL39P62891 51 aaKnown RBP11.5□□□□□ -0.57
SPIN3-220ENST00000639257 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
SPIN3-220ENST00000639257 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
SPIN3-220ENST00000639257 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
SPIN3-220ENST00000639257 XCL1P47992 114 aa11.49□□□□□ -0.57
SPIN3-220ENST00000639257 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
SPIN3-220ENST00000639257 SS18Q15532 418 aa11.49□□□□□ -0.57
SPIN3-220ENST00000639257 Q6ZUT4 128 aa11.49□□□□□ -0.57
SPIN3-220ENST00000639257 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
SPIN3-220ENST00000639257 CIRBP-AS1Q8TBR5 109 aa11.48□□□□□ -0.57
SPIN3-220ENST00000639257 C1orf196B1AJZ1 125 aa11.47□□□□□ -0.57
SPIN3-220ENST00000639257 RHEBQ15382 184 aa11.47□□□□□ -0.57
SPIN3-220ENST00000639257 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
SPIN3-220ENST00000639257 AP5S1Q9NUS5 200 aa11.47□□□□□ -0.57
SPIN3-220ENST00000639257 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
SPIN3-220ENST00000639257 RNASE13Q5GAN3 156 aaKnown RBP11.46□□□□□ -0.57
SPIN3-220ENST00000639257 Q8N8P6 123 aa11.46□□□□□ -0.57
SPIN3-220ENST00000639257 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.45□□□□□ -0.58
SPIN3-220ENST00000639257 IGHV1-58A0A0C4DH39 117 aa11.45□□□□□ -0.58
SPIN3-220ENST00000639257 K7EMI3 77 aa11.45□□□□□ -0.58
SPIN3-220ENST00000639257 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
SPIN3-220ENST00000639257 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
SPIN3-220ENST00000639257 FAM229AH3BQW9 127 aa11.44□□□□□ -0.58
SPIN3-220ENST00000639257 PANO1I0J062 215 aa11.44□□□□□ -0.58
SPIN3-220ENST00000639257 RAB5AP20339 215 aa11.44□□□□□ -0.58
SPIN3-220ENST00000639257 HIGD2BQ4VC39 106 aa11.44□□□□□ -0.58
SPIN3-220ENST00000639257 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
SPIN3-220ENST00000639257 OPRPNQ99935 248 aaPredicted RBP11.43□□□□□ -0.58
SPIN3-220ENST00000639257 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 TRAV13-1A0A0B4J241 112 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 S100PP25815 95 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
SPIN3-220ENST00000639257 COX19Q49B96 90 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
SPIN3-220ENST00000639257 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
SPIN3-220ENST00000639257 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
SPIN3-220ENST00000639257 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
SPIN3-220ENST00000639257 COX7A2LO14548 114 aa11.4□□□□□ -0.58
SPIN3-220ENST00000639257 NPSP0C0P6 89 aa11.4□□□□□ -0.58
SPIN3-220ENST00000639257 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
SPIN3-220ENST00000639257 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
SPIN3-220ENST00000639257 RPS10P5Q9NQ39 176 aa11.4□□□□□ -0.58
SPIN3-220ENST00000639257 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 MT-ND6P03923 174 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 KIAA1644Q3SXP7 199 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
SPIN3-220ENST00000639257 ALKBH7Q9BT30 221 aaPredicted RBP11.38□□□□□ -0.59
SPIN3-220ENST00000639257 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
SPIN3-220ENST00000639257 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
SPIN3-220ENST00000639257 LINC00173Q6ZV60 143 aa11.37□□□□□ -0.59
SPIN3-220ENST00000639257 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
SPIN3-220ENST00000639257 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms