RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
SMN2-216ENST00000638794 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
SMN2-216ENST00000638794 A0A1B0GUT8 65 aa10.55□□□□□ -0.72
SMN2-216ENST00000638794 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
SMN2-216ENST00000638794 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
SMN2-216ENST00000638794 POLR2KP53803 58 aaKnown RBP10.54□□□□□ -0.72
SMN2-216ENST00000638794 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
SMN2-216ENST00000638794 LINC01551Q86U37 167 aa10.54□□□□□ -0.72
SMN2-216ENST00000638794 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
SMN2-216ENST00000638794 CARD19Q96LW7 228 aa10.54□□□□□ -0.72
SMN2-216ENST00000638794 CDC42SE2Q9NRR3 84 aa10.54□□□□□ -0.72
SMN2-216ENST00000638794 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 RAB4AP20338 218 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 SS18Q15532 418 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 LINC00474Q9P2X8 69 aa10.53□□□□□ -0.72
SMN2-216ENST00000638794 C7orf77A4D0Y5 90 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 AKAP14Q86UN6 197 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 ZNF664Q8N3J9 261 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 LINC01600Q96MT4 127 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
SMN2-216ENST00000638794 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
SMN2-216ENST00000638794 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
SMN2-216ENST00000638794 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
SMN2-216ENST00000638794 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
SMN2-216ENST00000638794 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
SMN2-216ENST00000638794 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
SMN2-216ENST00000638794 ODF1Q14990 250 aa10.49□□□□□ -0.73
SMN2-216ENST00000638794 VCYO14598 125 aa10.48□□□□□ -0.73
SMN2-216ENST00000638794 CAMPP49913 170 aa10.48□□□□□ -0.73
SMN2-216ENST00000638794 NRACQ8N912 160 aa10.48□□□□□ -0.73
SMN2-216ENST00000638794 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 C1orf196B1AJZ1 125 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
SMN2-216ENST00000638794 FCER1GP30273 86 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
SMN2-216ENST00000638794 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 V9GYV3 84 aa10.47□□□□□ -0.73
SMN2-216ENST00000638794 hCG_2014768A0A024R1R8 64 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 COX7A2LO14548 114 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 MALP21145 153 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
SMN2-216ENST00000638794 RIGQ13278 110 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 Q6ZRP5 223 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
SMN2-216ENST00000638794 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
SMN2-216ENST00000638794 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
SMN2-216ENST00000638794 TRAV13-1A0A0B4J241 112 aa10.44□□□□□ -0.74
SMN2-216ENST00000638794 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
SMN2-216ENST00000638794 PPP1R17O96001 155 aa10.44□□□□□ -0.74
SMN2-216ENST00000638794 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMN2-216ENST00000638794 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
SMN2-216ENST00000638794 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
SMN2-216ENST00000638794 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 Q6ZUT4 128 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 NAT8BQ9UHF3 227 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 RNF213Q63HN8 5207 aa10.43□□□□□ -0.74
SMN2-216ENST00000638794 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
SMN2-216ENST00000638794 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
SMN2-216ENST00000638794 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
SMN2-216ENST00000638794 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
SMN2-216ENST00000638794 APOMO95445 188 aa10.41□□□□□ -0.74
SMN2-216ENST00000638794 RPL23P62829 140 aaKnown RBP10.41□□□□□ -0.74
SMN2-216ENST00000638794 TMEM241Q24JQ0 296 aa10.41□□□□□ -0.74
SMN2-216ENST00000638794 FAM104BQ5XKR9 115 aa10.41□□□□□ -0.74
SMN2-216ENST00000638794 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.4□□□□□ -0.74
SMN2-216ENST00000638794 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
SMN2-216ENST00000638794 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.74
SMN2-216ENST00000638794 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
SMN2-216ENST00000638794 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
SMN2-216ENST00000638794 ADIRFQ15847 76 aa10.39□□□□□ -0.75
SMN2-216ENST00000638794 FAM74A3Q4VXF1 159 aa10.39□□□□□ -0.75
SMN2-216ENST00000638794 TMEM18Q96B42 140 aa10.39□□□□□ -0.75
SMN2-216ENST00000638794 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
SMN2-216ENST00000638794 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
SMN2-216ENST00000638794 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
SMN2-216ENST00000638794 TRBV24-1A0A075B6N3 115 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 SMIM27A0A1W2PRY6 76 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 C9JQL5 133 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 CKS2P33552 79 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
SMN2-216ENST00000638794 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
SMN2-216ENST00000638794 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
SMN2-216ENST00000638794 TNFRSF6BO95407 300 aa10.35□□□□□ -0.75
SMN2-216ENST00000638794 MT-ND6P03923 174 aa10.35□□□□□ -0.75
SMN2-216ENST00000638794 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
SMN2-216ENST00000638794 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
SMN2-216ENST00000638794 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms