RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 LOC389332A0A1B0GUA5 103 aa8.17□□□□□ -1.1
CLN6-225ENST00000638144 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
CLN6-225ENST00000638144 XGP55808 180 aa8.17□□□□□ -1.1
CLN6-225ENST00000638144 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
CLN6-225ENST00000638144 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 PPBPP02775 128 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 C10orf91Q5T1B1 145 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
CLN6-225ENST00000638144 CLRN3Q8NCR9 226 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 CTDSP1Q9GZU7 261 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
CLN6-225ENST00000638144 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
CLN6-225ENST00000638144 XCL1P47992 114 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.1
CLN6-225ENST00000638144 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 C14orf177Q52M58 125 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 Q6ZUT4 128 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
CLN6-225ENST00000638144 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
CLN6-225ENST00000638144 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
CLN6-225ENST00000638144 PHOX2AO14813 284 aa8.14□□□□□ -1.11
CLN6-225ENST00000638144 CCL25O15444 150 aa8.14□□□□□ -1.11
CLN6-225ENST00000638144 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
CLN6-225ENST00000638144 ZNF664Q8N3J9 261 aa8.14□□□□□ -1.11
CLN6-225ENST00000638144 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
CLN6-225ENST00000638144 APOC3P02656 99 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 S100PP25815 95 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 MAP1LC3AQ9H492 121 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
CLN6-225ENST00000638144 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
CLN6-225ENST00000638144 FOXI1Q12951 378 aa8.12□□□□□ -1.11
CLN6-225ENST00000638144 RHEBQ15382 184 aa8.12□□□□□ -1.11
CLN6-225ENST00000638144 Q8N1X5 172 aa8.12□□□□□ -1.11
CLN6-225ENST00000638144 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
CLN6-225ENST00000638144 RAB5AP20339 215 aa8.11□□□□□ -1.11
CLN6-225ENST00000638144 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
CLN6-225ENST00000638144 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
CLN6-225ENST00000638144 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
CLN6-225ENST00000638144 TGIF2-C20orf24A0A0A6YYL0 155 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 SLPIP03973 132 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 SS18Q15532 418 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 Q8N8P6 123 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
CLN6-225ENST00000638144 FAT1Q14517 4588 aa8.09□□□□□ -1.11
CLN6-225ENST00000638144 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
CLN6-225ENST00000638144 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.11
CLN6-225ENST00000638144 Q6ZSA8 131 aa8.09□□□□□ -1.11
CLN6-225ENST00000638144 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.11
CLN6-225ENST00000638144 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
CLN6-225ENST00000638144 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 NDUFA5Q16718 116 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 AP5S1Q9NUS5 200 aa8.08□□□□□ -1.12
CLN6-225ENST00000638144 SNAPINO95295 136 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 Q5VSD8 79 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 CD164L2Q6UWJ8 174 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 SVBPQ8N300 66 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
CLN6-225ENST00000638144 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
CLN6-225ENST00000638144 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 IFITM10A6NMD0 228 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 PANO1I0J062 215 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
CLN6-225ENST00000638144 FABP9Q0Z7S8 132 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
CLN6-225ENST00000638144 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
CLN6-225ENST00000638144 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
CLN6-225ENST00000638144 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
CLN6-225ENST00000638144 CHTF8P0CG12 524 aa8.05□□□□□ -1.12
CLN6-225ENST00000638144 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
CLN6-225ENST00000638144 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
CLN6-225ENST00000638144 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
CLN6-225ENST00000638144 CYSLTR1Q9Y271 337 aa8.05□□□□□ -1.12
CLN6-225ENST00000638144 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 COX7A2LO14548 114 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 MALP21145 153 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
CLN6-225ENST00000638144 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
CLN6-225ENST00000638144 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
CLN6-225ENST00000638144 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
CLN6-225ENST00000638144 MT-ND6P03923 174 aa8.03□□□□□ -1.12
CLN6-225ENST00000638144 COX19Q49B96 90 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms