RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ZNF25P17030 456 aaPredicted RBP7.22□□□□□ -1.25
DDX41-219ENST00000629036 IMMP2LQ96T52 175 aa7.22□□□□□ -1.25
DDX41-219ENST00000629036 SMIM2Q9BVW6 85 aa7.22□□□□□ -1.25
DDX41-219ENST00000629036 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 CKS2P33552 79 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 LINC01620Q4KN68 170 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 TMEM136Q6ZRR5 245 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 C15orf56Q8N910 161 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.26
DDX41-219ENST00000629036 PRSS47A8MTI9 375 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 PPBPP02775 128 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 HAMPP81172 84 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 ORMDL3Q8N138 153 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 CTDSP1Q9GZU7 261 aa7.2□□□□□ -1.26
DDX41-219ENST00000629036 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
DDX41-219ENST00000629036 SLPIP03973 132 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 FOXI1Q12951 378 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
DDX41-219ENST00000629036 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 PKHD1L1Q86WI1 4243 aa7.19□□□□□ -1.26
DDX41-219ENST00000629036 TRAV9-1A0A075B6T8 112 aa7.18□□□□□ -1.26
DDX41-219ENST00000629036 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
DDX41-219ENST00000629036 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
DDX41-219ENST00000629036 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
DDX41-219ENST00000629036 Q6ZUT4 128 aa7.18□□□□□ -1.26
DDX41-219ENST00000629036 CLRN3Q8NCR9 226 aa7.18□□□□□ -1.26
DDX41-219ENST00000629036 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
DDX41-219ENST00000629036 GAGE12HA6NDE8 117 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 J3QL48 77 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 TCAPO15273 167 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
DDX41-219ENST00000629036 C14orf177Q52M58 125 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 Q5VSD8 79 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
DDX41-219ENST00000629036 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
DDX41-219ENST00000629036 FCER1GP30273 86 aa7.16□□□□□ -1.26
DDX41-219ENST00000629036 RHEBQ15382 184 aa7.16□□□□□ -1.26
DDX41-219ENST00000629036 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
DDX41-219ENST00000629036 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.26
DDX41-219ENST00000629036 PANO1I0J062 215 aa7.15□□□□□ -1.26
DDX41-219ENST00000629036 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.26
DDX41-219ENST00000629036 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
DDX41-219ENST00000629036 CCL25O15444 150 aa7.14□□□□□ -1.27
DDX41-219ENST00000629036 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
DDX41-219ENST00000629036 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
DDX41-219ENST00000629036 Q8N8P6 123 aa7.14□□□□□ -1.27
DDX41-219ENST00000629036 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
DDX41-219ENST00000629036 YPEL4Q96NS1 127 aa7.14□□□□□ -1.27
DDX41-219ENST00000629036 OPRPNQ99935 248 aaPredicted RBP7.14□□□□□ -1.27
DDX41-219ENST00000629036 XCL1P47992 114 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 CIRBPQ14011 172 aaKnown RBP7.13□□□□□ -1.27
DDX41-219ENST00000629036 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 SDIM1Q6ZPB5 146 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 GNB1LQ9BYB4 327 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 SPANXA1Q9NS26 97 aa7.13□□□□□ -1.27
DDX41-219ENST00000629036 LOC389332A0A1B0GUA5 103 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
DDX41-219ENST00000629036 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 RPS10P5Q9NQ39 176 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 PYGO1Q9Y3Y4 419 aa7.12□□□□□ -1.27
DDX41-219ENST00000629036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
DDX41-219ENST00000629036 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
DDX41-219ENST00000629036 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
DDX41-219ENST00000629036 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
DDX41-219ENST00000629036 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
DDX41-219ENST00000629036 ALKBH7Q9BT30 221 aaPredicted RBP7.11□□□□□ -1.27
DDX41-219ENST00000629036 CHAC1Q9BUX1 264 aa7.11□□□□□ -1.27
DDX41-219ENST00000629036 TGIF2-C20orf24A0A0A6YYL0 155 aa7.1□□□□□ -1.27
DDX41-219ENST00000629036 IGIPA6NJ69 53 aa7.1□□□□□ -1.27
DDX41-219ENST00000629036 APOC3P02656 99 aa7.1□□□□□ -1.27
DDX41-219ENST00000629036 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
DDX41-219ENST00000629036 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
DDX41-219ENST00000629036 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 K7EMI3 77 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 S100PP25815 95 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 SS18Q15532 418 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
DDX41-219ENST00000629036 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.27
DDX41-219ENST00000629036 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.28
DDX41-219ENST00000629036 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
DDX41-219ENST00000629036 MT-ND6P03923 174 aa7.08□□□□□ -1.28
DDX41-219ENST00000629036 ZC2HC1BQ5TFG8 222 aa7.08□□□□□ -1.28
DDX41-219ENST00000629036 C2orf66Q6UXQ4 117 aa7.08□□□□□ -1.28
DDX41-219ENST00000629036 SVBPQ8N300 66 aa7.08□□□□□ -1.28
DDX41-219ENST00000629036 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms