RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
CIRBP-246ENST00000628979 PPBPP02775 128 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 MRPL52Q86TS9 123 aaKnown RBP13.43□□□□□ -0.26
CIRBP-246ENST00000628979 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 CLRN3Q8NCR9 226 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 SMIM2Q9BVW6 85 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 PCLOQ9Y6V0 5065 aa13.43□□□□□ -0.26
CIRBP-246ENST00000628979 DNAH8Q96JB1 4490 aa13.42□□□□□ -0.26
CIRBP-246ENST00000628979 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
CIRBP-246ENST00000628979 PRELID3AQ96N28 172 aa13.42□□□□□ -0.26
CIRBP-246ENST00000628979 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
CIRBP-246ENST00000628979 XCL1P47992 114 aa13.41□□□□□ -0.26
CIRBP-246ENST00000628979 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
CIRBP-246ENST00000628979 PHOX2AO14813 284 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 TCAPO15273 167 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 RNASE13Q5GAN3 156 aaKnown RBP13.4□□□□□ -0.26
CIRBP-246ENST00000628979 Q5VSD8 79 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 TMEM18Q96B42 140 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 SEC11CQ9BY50 192 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 UBE2D4Q9Y2X8 147 aa13.4□□□□□ -0.26
CIRBP-246ENST00000628979 CCL25O15444 150 aa13.39□□□□□ -0.27
CIRBP-246ENST00000628979 SS18Q15532 418 aa13.39□□□□□ -0.27
CIRBP-246ENST00000628979 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
CIRBP-246ENST00000628979 Q6ZSA8 131 aa13.39□□□□□ -0.27
CIRBP-246ENST00000628979 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
CIRBP-246ENST00000628979 ABCA13Q86UQ4 5058 aa13.38□□□□□ -0.27
CIRBP-246ENST00000628979 LOC389332A0A1B0GUA5 103 aa13.38□□□□□ -0.27
CIRBP-246ENST00000628979 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
CIRBP-246ENST00000628979 IMMP2LQ96T52 175 aa13.38□□□□□ -0.27
CIRBP-246ENST00000628979 FOXI1Q12951 378 aa13.37□□□□□ -0.27
CIRBP-246ENST00000628979 HIGD2BQ4VC39 106 aa13.37□□□□□ -0.27
CIRBP-246ENST00000628979 C15orf56Q8N910 161 aa13.37□□□□□ -0.27
CIRBP-246ENST00000628979 C9orf163Q8N9P6 203 aa13.37□□□□□ -0.27
CIRBP-246ENST00000628979 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
CIRBP-246ENST00000628979 RAB5AP20339 215 aa13.36□□□□□ -0.27
CIRBP-246ENST00000628979 Q6ZUT4 128 aa13.35□□□□□ -0.27
CIRBP-246ENST00000628979 SCXQ7RTU7 201 aa13.35□□□□□ -0.27
CIRBP-246ENST00000628979 MAP1LC3AQ9H492 121 aa13.35□□□□□ -0.27
CIRBP-246ENST00000628979 CSDC2Q9Y534 153 aaKnown RBP13.35□□□□□ -0.27
CIRBP-246ENST00000628979 SLPIP03973 132 aa13.34□□□□□ -0.27
CIRBP-246ENST00000628979 CNBPP62633 177 aaKnown RBP13.34□□□□□ -0.27
CIRBP-246ENST00000628979 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-246ENST00000628979 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
CIRBP-246ENST00000628979 S100PP25815 95 aa13.33□□□□□ -0.28
CIRBP-246ENST00000628979 CHAC1Q9BUX1 264 aa13.33□□□□□ -0.28
CIRBP-246ENST00000628979 TIMM21Q9BVV7 248 aa13.33□□□□□ -0.28
CIRBP-246ENST00000628979 LAMTOR2Q9Y2Q5 125 aa13.33□□□□□ -0.28
CIRBP-246ENST00000628979 CD164L2Q6UWJ8 174 aa13.32□□□□□ -0.28
CIRBP-246ENST00000628979 OPRPNQ99935 248 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-246ENST00000628979 FAT1Q14517 4588 aa13.31□□□□□ -0.28
CIRBP-246ENST00000628979 C1orf196B1AJZ1 125 aa13.31□□□□□ -0.28
CIRBP-246ENST00000628979 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
CIRBP-246ENST00000628979 RPS10P5Q9NQ39 176 aa13.31□□□□□ -0.28
CIRBP-246ENST00000628979 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
CIRBP-246ENST00000628979 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
CIRBP-246ENST00000628979 C10orf91Q5T1B1 145 aa13.3□□□□□ -0.28
CIRBP-246ENST00000628979 LINC00528Q8N1L1 170 aa13.3□□□□□ -0.28
CIRBP-246ENST00000628979 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
CIRBP-246ENST00000628979 TRAV9-1A0A075B6T8 112 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 IGHV1-58A0A0C4DH39 117 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 INAFM2P0DMQ5 153 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 Q8N8P6 123 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
CIRBP-246ENST00000628979 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
CIRBP-246ENST00000628979 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-246ENST00000628979 MALP21145 153 aa13.28□□□□□ -0.28
CIRBP-246ENST00000628979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-246ENST00000628979 DPH3Q96FX2 82 aa13.27□□□□□ -0.29
CIRBP-246ENST00000628979 PANO1I0J062 215 aa13.26□□□□□ -0.29
CIRBP-246ENST00000628979 COX7A2LO14548 114 aa13.26□□□□□ -0.29
CIRBP-246ENST00000628979 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-246ENST00000628979 RHEBQ15382 184 aa13.26□□□□□ -0.29
CIRBP-246ENST00000628979 C5orf38Q86SI9 138 aa13.26□□□□□ -0.29
CIRBP-246ENST00000628979 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
CIRBP-246ENST00000628979 IFITM10A6NMD0 228 aa13.25□□□□□ -0.29
CIRBP-246ENST00000628979 MRPS36P82909 103 aaKnown RBP13.25□□□□□ -0.29
CIRBP-246ENST00000628979 VPS13BQ7Z7G8 4022 aa13.25□□□□□ -0.29
CIRBP-246ENST00000628979 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
CIRBP-246ENST00000628979 APOC3P02656 99 aa13.24□□□□□ -0.29
CIRBP-246ENST00000628979 PLA2G1BP04054 148 aaKnown RBP13.23□□□□□ -0.29
CIRBP-246ENST00000628979 CHTF8P0CG12 524 aa13.23□□□□□ -0.29
CIRBP-246ENST00000628979 ORMDL2Q53FV1 153 aa13.23□□□□□ -0.29
CIRBP-246ENST00000628979 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
CIRBP-246ENST00000628979 COX6A2Q02221 97 aa13.22□□□□□ -0.29
CIRBP-246ENST00000628979 C2orf66Q6UXQ4 117 aa13.22□□□□□ -0.29
CIRBP-246ENST00000628979 NXT2Q9NPJ8 142 aaKnown RBP13.22□□□□□ -0.29
CIRBP-246ENST00000628979 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
CIRBP-246ENST00000628979 PYGO1Q9Y3Y4 419 aa13.22□□□□□ -0.29
CIRBP-246ENST00000628979 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
CIRBP-246ENST00000628979 NDUFA5Q16718 116 aa13.2□□□□□ -0.3
CIRBP-246ENST00000628979 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
CIRBP-246ENST00000628979 TMEM141Q96I45 108 aa13.2□□□□□ -0.3
CIRBP-246ENST00000628979 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
CIRBP-246ENST00000628979 FABP9Q0Z7S8 132 aa13.19□□□□□ -0.3
CIRBP-246ENST00000628979 COX19Q49B96 90 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms