RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
SF1-220ENST00000626028 FCER1GP30273 86 aa14.49□□□□□ -0.09
SF1-220ENST00000626028 CKS2P33552 79 aa14.49□□□□□ -0.09
SF1-220ENST00000626028 VPS13BQ7Z7G8 4022 aa14.49□□□□□ -0.09
SF1-220ENST00000626028 SMKR1H3BMG3 65 aa14.48□□□□□ -0.09
SF1-220ENST00000626028 PHOX2AO14813 284 aa14.48□□□□□ -0.09
SF1-220ENST00000626028 HAMPP81172 84 aa14.48□□□□□ -0.09
SF1-220ENST00000626028 AP5S1Q9NUS5 200 aa14.48□□□□□ -0.09
SF1-220ENST00000626028 hDV102S1A0JD36 115 aa14.47□□□□□ -0.09
SF1-220ENST00000626028 MRPL54Q6P161 138 aaKnown RBP14.47□□□□□ -0.09
SF1-220ENST00000626028 CHCHD10Q8WYQ3 142 aaPredicted RBP14.47□□□□□ -0.09
SF1-220ENST00000626028 CDC42SE2Q9NRR3 84 aa14.47□□□□□ -0.09
SF1-220ENST00000626028 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.46□□□□□ -0.09
SF1-220ENST00000626028 GAGE12HA6NDE8 117 aa14.46□□□□□ -0.09
SF1-220ENST00000626028 UQCC3Q6UW78 93 aa14.46□□□□□ -0.09
SF1-220ENST00000626028 SCXQ7RTU7 201 aa14.46□□□□□ -0.09
SF1-220ENST00000626028 TMEM18Q96B42 140 aa14.46□□□□□ -0.09
SF1-220ENST00000626028 IGKV3OR2-268A0A0C4DH90 116 aa14.45□□□□□ -0.1
SF1-220ENST00000626028 CCL25O15444 150 aa14.45□□□□□ -0.1
SF1-220ENST00000626028 TNFRSF6BO95407 300 aa14.44□□□□□ -0.1
SF1-220ENST00000626028 PLA2G1BP04054 148 aaKnown RBP14.44□□□□□ -0.1
SF1-220ENST00000626028 INAFM2P0DMQ5 153 aa14.44□□□□□ -0.1
SF1-220ENST00000626028 ZNF664Q8N3J9 261 aa14.44□□□□□ -0.1
SF1-220ENST00000626028 TIMM21Q9BVV7 248 aa14.44□□□□□ -0.1
SF1-220ENST00000626028 LINC00959A0A1B0GUT2 108 aa14.43□□□□□ -0.1
SF1-220ENST00000626028 FAT1Q14517 4588 aa14.43□□□□□ -0.1
SF1-220ENST00000626028 D6R8Y8 96 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 SS18Q15532 418 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 SDIM1Q6ZPB5 146 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 ORMDL3Q8N138 153 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 C15orf56Q8N910 161 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
SF1-220ENST00000626028 FOXI1Q12951 378 aa14.41□□□□□ -0.1
SF1-220ENST00000626028 CIRBP-AS1Q8TBR5 109 aa14.41□□□□□ -0.1
SF1-220ENST00000626028 UBE2D4Q9Y2X8 147 aa14.41□□□□□ -0.1
SF1-220ENST00000626028 IGHV3-64A0A075B6Q5 118 aa14.4□□□□□ -0.1
SF1-220ENST00000626028 LINC00528Q8N1L1 170 aa14.4□□□□□ -0.1
SF1-220ENST00000626028 IMMP2LQ96T52 175 aa14.4□□□□□ -0.1
SF1-220ENST00000626028 LAMTOR2Q9Y2Q5 125 aa14.4□□□□□ -0.1
SF1-220ENST00000626028 GVQW2A0A096LPI5 108 aaPredicted RBP14.39□□□□□ -0.11
SF1-220ENST00000626028 IFITM2Q01629 132 aa14.39□□□□□ -0.11
SF1-220ENST00000626028 CD164L2Q6UWJ8 174 aa14.39□□□□□ -0.11
SF1-220ENST00000626028 C1orf196B1AJZ1 125 aa14.38□□□□□ -0.11
SF1-220ENST00000626028 NPYP01303 97 aa14.37□□□□□ -0.11
SF1-220ENST00000626028 XCL1P47992 114 aa14.37□□□□□ -0.11
SF1-220ENST00000626028 CIRBPQ14011 172 aaKnown RBP14.37□□□□□ -0.11
SF1-220ENST00000626028 TMEM136Q6ZRR5 245 aa14.37□□□□□ -0.11
SF1-220ENST00000626028 IGHV1-58A0A0C4DH39 117 aa14.36□□□□□ -0.11
SF1-220ENST00000626028 PRSS47A8MTI9 375 aa14.36□□□□□ -0.11
SF1-220ENST00000626028 SLPIP03973 132 aa14.36□□□□□ -0.11
SF1-220ENST00000626028 PRELID3AQ96N28 172 aa14.36□□□□□ -0.11
SF1-220ENST00000626028 TMEM218A2RU14 115 aa14.35□□□□□ -0.11
SF1-220ENST00000626028 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
SF1-220ENST00000626028 CTDSP1Q9GZU7 261 aa14.34□□□□□ -0.11
SF1-220ENST00000626028 PKIGQ9Y2B9 76 aa14.34□□□□□ -0.11
SF1-220ENST00000626028 RAB5AP20339 215 aa14.33□□□□□ -0.12
SF1-220ENST00000626028 SEC11CQ9BY50 192 aa14.33□□□□□ -0.12
SF1-220ENST00000626028 FLG2Q5D862 2391 aaPredicted RBP14.33□□□□□ -0.12
SF1-220ENST00000626028 TRAV9-1A0A075B6T8 112 aa14.32□□□□□ -0.12
SF1-220ENST00000626028 MRPS36P82909 103 aaKnown RBP14.32□□□□□ -0.12
SF1-220ENST00000626028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.32□□□□□ -0.12
SF1-220ENST00000626028 ADCYAP1P18509 176 aa14.31□□□□□ -0.12
SF1-220ENST00000626028 HIGD2BQ4VC39 106 aa14.31□□□□□ -0.12
SF1-220ENST00000626028 K7EMI3 77 aa14.3□□□□□ -0.12
SF1-220ENST00000626028 MAP1LC3AQ9H492 121 aa14.3□□□□□ -0.12
SF1-220ENST00000626028 COX7A2LO14548 114 aa14.29□□□□□ -0.12
SF1-220ENST00000626028 RPL39P62891 51 aaKnown RBP14.29□□□□□ -0.12
SF1-220ENST00000626028 Q6ZUT4 128 aa14.29□□□□□ -0.12
SF1-220ENST00000626028 DMBT1Q9UGM3 2413 aaPredicted RBP14.29□□□□□ -0.12
SF1-220ENST00000626028 PYGO1Q9Y3Y4 419 aa14.28□□□□□ -0.12
SF1-220ENST00000626028 TRAV13-1A0A0B4J241 112 aa14.27□□□□□ -0.13
SF1-220ENST00000626028 ZNF561-AS1K7EIQ3 104 aa14.27□□□□□ -0.13
SF1-220ENST00000626028 MALP21145 153 aa14.27□□□□□ -0.13
SF1-220ENST00000626028 SPACA4Q8TDM5 124 aa14.27□□□□□ -0.13
SF1-220ENST00000626028 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
SF1-220ENST00000626028 PANO1I0J062 215 aa14.25□□□□□ -0.13
SF1-220ENST00000626028 RNASE13Q5GAN3 156 aaKnown RBP14.25□□□□□ -0.13
SF1-220ENST00000626028 Q8N8P6 123 aa14.25□□□□□ -0.13
SF1-220ENST00000626028 LINC00474Q9P2X8 69 aa14.25□□□□□ -0.13
SF1-220ENST00000626028 APOMO95445 188 aa14.24□□□□□ -0.13
SF1-220ENST00000626028 KRTAP10-4P60372 401 aaPredicted RBP14.24□□□□□ -0.13
SF1-220ENST00000626028 COX6A2Q02221 97 aa14.24□□□□□ -0.13
SF1-220ENST00000626028 COMMD7Q86VX2 200 aa14.24□□□□□ -0.13
SF1-220ENST00000626028 FAM104AQ969W3 186 aa14.24□□□□□ -0.13
SF1-220ENST00000626028 S100PP25815 95 aa14.23□□□□□ -0.13
SF1-220ENST00000626028 C10orf91Q5T1B1 145 aa14.23□□□□□ -0.13
SF1-220ENST00000626028 DPH3Q96FX2 82 aa14.23□□□□□ -0.13
SF1-220ENST00000626028 CARD19Q96LW7 228 aa14.23□□□□□ -0.13
SF1-220ENST00000626028 NXT2Q9NPJ8 142 aaKnown RBP14.23□□□□□ -0.13
SF1-220ENST00000626028 NPSP0C0P6 89 aa14.22□□□□□ -0.13
SF1-220ENST00000626028 G0S2P27469 103 aa14.22□□□□□ -0.13
SF1-220ENST00000626028 SYCNQ0VAF6 134 aa14.22□□□□□ -0.13
SF1-220ENST00000626028 ORMDL2Q53FV1 153 aa14.22□□□□□ -0.13
SF1-220ENST00000626028 PLAC8Q9NZF1 115 aa14.22□□□□□ -0.13
SF1-220ENST00000626028 A0A087WYN8 130 aa14.21□□□□□ -0.13
SF1-220ENST00000626028 LOC389332A0A1B0GUA5 103 aa14.21□□□□□ -0.13
SF1-220ENST00000626028 RPL37AP61513 92 aaKnown RBP14.21□□□□□ -0.13
SF1-220ENST00000626028 COX19Q49B96 90 aa14.21□□□□□ -0.13
SF1-220ENST00000626028 MYCBP2O75592 4640 aa14.21□□□□□ -0.14
SF1-220ENST00000626028 CHTF8P0CG12 524 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms