RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
PCDHB4-202ENST00000623478 VCYO14598 125 aa13.44□□□□□ -0.26
PCDHB4-202ENST00000623478 SUMO2P61956 95 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-202ENST00000623478 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-202ENST00000623478 AP5S1Q9NUS5 200 aa13.44□□□□□ -0.26
PCDHB4-202ENST00000623478 HIGD2BQ4VC39 106 aa13.43□□□□□ -0.26
PCDHB4-202ENST00000623478 A0A1B0GW15 77 aa13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 PPP1R17O96001 155 aa13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 FCER1GP30273 86 aa13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 XCL1P47992 114 aa13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 FOXI1Q12951 378 aa13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 MRPL52Q86TS9 123 aaKnown RBP13.42□□□□□ -0.26
PCDHB4-202ENST00000623478 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
PCDHB4-202ENST00000623478 KRTAP10-4P60372 401 aaPredicted RBP13.41□□□□□ -0.26
PCDHB4-202ENST00000623478 RAB14P61106 215 aa13.41□□□□□ -0.26
PCDHB4-202ENST00000623478 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
PCDHB4-202ENST00000623478 CDC42SE2Q9NRR3 84 aa13.41□□□□□ -0.26
PCDHB4-202ENST00000623478 A0A1B0GXF2 115 aa13.4□□□□□ -0.26
PCDHB4-202ENST00000623478 CCL25O15444 150 aa13.4□□□□□ -0.26
PCDHB4-202ENST00000623478 HBBP68871 147 aa13.4□□□□□ -0.26
PCDHB4-202ENST00000623478 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 CKS2P33552 79 aa13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 ZNF664Q8N3J9 261 aa13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 KIR2DL4Q99706 377 aa13.39□□□□□ -0.27
PCDHB4-202ENST00000623478 PKHD1L1Q86WI1 4243 aa13.38□□□□□ -0.27
PCDHB4-202ENST00000623478 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
PCDHB4-202ENST00000623478 LRP1Q07954 4544 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-202ENST00000623478 TRBV24-1A0A075B6N3 115 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 D6R8Y8 96 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 S100A8P05109 93 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 CHTF8P0CG12 524 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 C20orf78Q9BR46 151 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 UBE2D4Q9Y2X8 147 aa13.37□□□□□ -0.27
PCDHB4-202ENST00000623478 F8W036 122 aa13.36□□□□□ -0.27
PCDHB4-202ENST00000623478 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
PCDHB4-202ENST00000623478 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
PCDHB4-202ENST00000623478 FAT3Q8TDW7 4589 aa13.35□□□□□ -0.27
PCDHB4-202ENST00000623478 SS18Q15532 418 aa13.35□□□□□ -0.27
PCDHB4-202ENST00000623478 NPYP01303 97 aa13.34□□□□□ -0.27
PCDHB4-202ENST00000623478 SMIM2Q9BVW6 85 aa13.34□□□□□ -0.27
PCDHB4-202ENST00000623478 RPL32P62910 135 aaKnown RBP13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 COX6A2Q02221 97 aa13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 CD164L2Q6UWJ8 174 aa13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 Q6ZUT4 128 aa13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 CSDC2Q9Y534 153 aaKnown RBP13.33□□□□□ -0.28
PCDHB4-202ENST00000623478 RPL37AP61513 92 aaKnown RBP13.32□□□□□ -0.28
PCDHB4-202ENST00000623478 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
PCDHB4-202ENST00000623478 ATP5L2Q7Z4Y8 100 aa13.32□□□□□ -0.28
PCDHB4-202ENST00000623478 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
PCDHB4-202ENST00000623478 IGHV1-58A0A0C4DH39 117 aa13.31□□□□□ -0.28
PCDHB4-202ENST00000623478 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
PCDHB4-202ENST00000623478 A0A087WYN8 130 aa13.3□□□□□ -0.28
PCDHB4-202ENST00000623478 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
PCDHB4-202ENST00000623478 PRSS3P2Q8NHM4 247 aa13.3□□□□□ -0.28
PCDHB4-202ENST00000623478 DPH3Q96FX2 82 aa13.3□□□□□ -0.28
PCDHB4-202ENST00000623478 TRAV13-1A0A0B4J241 112 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 J3QL48 77 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 TCAPO15273 167 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 PPBPP02775 128 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 MT-ND4LP03901 98 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 ORMDL3Q8N138 153 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 TMEM18Q96B42 140 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 TIMM21Q9BVV7 248 aa13.29□□□□□ -0.28
PCDHB4-202ENST00000623478 C1orf196B1AJZ1 125 aa13.28□□□□□ -0.28
PCDHB4-202ENST00000623478 PHOX2AO14813 284 aa13.28□□□□□ -0.28
PCDHB4-202ENST00000623478 IGKV2-24A0A0C4DH68 120 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 HNRNPA3P51991 378 aaKnown RBP13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 TMEM136Q6ZRR5 245 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 COMMD7Q86VX2 200 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 FAM104AQ969W3 186 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 ANAPC16Q96DE5 110 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 PRELID3AQ96N28 172 aa13.27□□□□□ -0.29
PCDHB4-202ENST00000623478 KRTAP29-1A8MX34 341 aaPredicted RBP13.26□□□□□ -0.29
PCDHB4-202ENST00000623478 UQCC3Q6UW78 93 aa13.26□□□□□ -0.29
PCDHB4-202ENST00000623478 COX7A2LO14548 114 aa13.25□□□□□ -0.29
PCDHB4-202ENST00000623478 CARD19Q96LW7 228 aa13.25□□□□□ -0.29
PCDHB4-202ENST00000623478 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
PCDHB4-202ENST00000623478 A0A096LNI7 61 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 MALP21145 153 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 MAJINQ3KP22 176 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 PLAC8Q9NZF1 115 aa13.24□□□□□ -0.29
PCDHB4-202ENST00000623478 ADCYAP1P18509 176 aa13.23□□□□□ -0.29
PCDHB4-202ENST00000623478 C5orf38Q86SI9 138 aa13.23□□□□□ -0.29
PCDHB4-202ENST00000623478 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
PCDHB4-202ENST00000623478 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
PCDHB4-202ENST00000623478 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
PCDHB4-202ENST00000623478 RAB5AP20339 215 aa13.21□□□□□ -0.29
PCDHB4-202ENST00000623478 TMEM218A2RU14 115 aa13.2□□□□□ -0.3
PCDHB4-202ENST00000623478 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
PCDHB4-202ENST00000623478 STPG4Q8N801 248 aa13.2□□□□□ -0.3
PCDHB4-202ENST00000623478 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
PCDHB4-202ENST00000623478 LAMTOR2Q9Y2Q5 125 aa13.19□□□□□ -0.3
PCDHB4-202ENST00000623478 IFITM10A6NMD0 228 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms