RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 FCER1GP30273 86 aa16.15■□□□□ 0.18
VEGFA-229ENST00000621747 MRPL52Q86TS9 123 aaKnown RBP16.15■□□□□ 0.18
VEGFA-229ENST00000621747 A0A1B0GW15 77 aa16.14■□□□□ 0.17
VEGFA-229ENST00000621747 PANO1I0J062 215 aa16.14■□□□□ 0.17
VEGFA-229ENST00000621747 RPL37AP61513 92 aaKnown RBP16.14■□□□□ 0.17
VEGFA-229ENST00000621747 SUMO2P61956 95 aaKnown RBP16.14■□□□□ 0.17
VEGFA-229ENST00000621747 FAM104BQ5XKR9 115 aa16.14■□□□□ 0.17
VEGFA-229ENST00000621747 NRACQ8N912 160 aa16.14■□□□□ 0.17
VEGFA-229ENST00000621747 LINC00959A0A1B0GUT2 108 aa16.13■□□□□ 0.17
VEGFA-229ENST00000621747 PPP1R2P9O14990 202 aa16.13■□□□□ 0.17
VEGFA-229ENST00000621747 FOXI1Q12951 378 aa16.13■□□□□ 0.17
VEGFA-229ENST00000621747 CIRBPQ14011 172 aaKnown RBP16.13■□□□□ 0.17
VEGFA-229ENST00000621747 HIGD2BQ4VC39 106 aa16.13■□□□□ 0.17
VEGFA-229ENST00000621747 KIR2DL4Q99706 377 aa16.13■□□□□ 0.17
VEGFA-229ENST00000621747 KRTAP29-1A8MX34 341 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-229ENST00000621747 XCL1P47992 114 aa16.12■□□□□ 0.17
VEGFA-229ENST00000621747 CAMPP49913 170 aa16.12■□□□□ 0.17
VEGFA-229ENST00000621747 SMAGPQ0VAQ4 97 aa16.12■□□□□ 0.17
VEGFA-229ENST00000621747 MRPL51Q4U2R6 128 aaKnown RBP16.12■□□□□ 0.17
VEGFA-229ENST00000621747 CDC42SE2Q9NRR3 84 aa16.12■□□□□ 0.17
VEGFA-229ENST00000621747 SS18Q15532 418 aa16.11■□□□□ 0.17
VEGFA-229ENST00000621747 ZNF664Q8N3J9 261 aa16.11■□□□□ 0.17
VEGFA-229ENST00000621747 DPH3Q96FX2 82 aa16.11■□□□□ 0.17
VEGFA-229ENST00000621747 GVQW2A0A096LPI5 108 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-229ENST00000621747 LINC00862A6NCI5 91 aa16.1■□□□□ 0.17
VEGFA-229ENST00000621747 CCL25O15444 150 aa16.1■□□□□ 0.17
VEGFA-229ENST00000621747 S100A8P05109 93 aa16.09■□□□□ 0.17
VEGFA-229ENST00000621747 C20orf78Q9BR46 151 aa16.08■□□□□ 0.16
VEGFA-229ENST00000621747 IGHV1-58A0A0C4DH39 117 aa16.07■□□□□ 0.16
VEGFA-229ENST00000621747 CKS2P33552 79 aa16.07■□□□□ 0.16
VEGFA-229ENST00000621747 SPACA4Q8TDM5 124 aa16.07■□□□□ 0.16
VEGFA-229ENST00000621747 F8W036 122 aa16.06■□□□□ 0.16
VEGFA-229ENST00000621747 CHTF8P0CG12 524 aa16.06■□□□□ 0.16
VEGFA-229ENST00000621747 HBBP68871 147 aa16.06■□□□□ 0.16
VEGFA-229ENST00000621747 MRPL54Q6P161 138 aaKnown RBP16.06■□□□□ 0.16
VEGFA-229ENST00000621747 CD164L2Q6UWJ8 174 aa16.06■□□□□ 0.16
VEGFA-229ENST00000621747 TMEM18Q96B42 140 aa16.06■□□□□ 0.16
VEGFA-229ENST00000621747 CSDC2Q9Y534 153 aaKnown RBP16.06■□□□□ 0.16
VEGFA-229ENST00000621747 TRBV24-1A0A075B6N3 115 aa16.05■□□□□ 0.16
VEGFA-229ENST00000621747 COX6A2Q02221 97 aa16.05■□□□□ 0.16
VEGFA-229ENST00000621747 UBE2D4Q9Y2X8 147 aa16.05■□□□□ 0.16
VEGFA-229ENST00000621747 A0A087WYN8 130 aa16.04■□□□□ 0.16
VEGFA-229ENST00000621747 TCAPO15273 167 aa16.04■□□□□ 0.16
VEGFA-229ENST00000621747 RPL32P62910 135 aaKnown RBP16.04■□□□□ 0.16
VEGFA-229ENST00000621747 A0A1B0GXF2 115 aa16.02■□□□□ 0.16
VEGFA-229ENST00000621747 C1orf196B1AJZ1 125 aa16.02■□□□□ 0.16
VEGFA-229ENST00000621747 TNFRSF6BO95407 300 aa16.02■□□□□ 0.16
VEGFA-229ENST00000621747 PKIGQ9Y2B9 76 aa16.02■□□□□ 0.16
VEGFA-229ENST00000621747 D6R8Y8 96 aa16.01■□□□□ 0.15
VEGFA-229ENST00000621747 OXTP01178 125 aa16.01■□□□□ 0.15
VEGFA-229ENST00000621747 PRSS3P2Q8NHM4 247 aa16.01■□□□□ 0.15
VEGFA-229ENST00000621747 RAB14P61106 215 aa16■□□□□ 0.15
VEGFA-229ENST00000621747 TIMM21Q9BVV7 248 aa16■□□□□ 0.15
VEGFA-229ENST00000621747 PLAC8Q9NZF1 115 aa16■□□□□ 0.15
VEGFA-229ENST00000621747 ZNF561-AS1K7EIQ3 104 aa15.99■□□□□ 0.15
VEGFA-229ENST00000621747 PPBPP02775 128 aa15.99■□□□□ 0.15
VEGFA-229ENST00000621747 ATP5L2Q7Z4Y8 100 aa15.99■□□□□ 0.15
VEGFA-229ENST00000621747 SMIM2Q9BVW6 85 aa15.99■□□□□ 0.15
VEGFA-229ENST00000621747 IGKV2-24A0A0C4DH68 120 aa15.98■□□□□ 0.15
VEGFA-229ENST00000621747 PHOX2AO14813 284 aa15.98■□□□□ 0.15
VEGFA-229ENST00000621747 MALP21145 153 aa15.98■□□□□ 0.15
VEGFA-229ENST00000621747 MAJINQ3KP22 176 aa15.98■□□□□ 0.15
VEGFA-229ENST00000621747 RNASE13Q5GAN3 156 aaKnown RBP15.98■□□□□ 0.15
VEGFA-229ENST00000621747 CARD19Q96LW7 228 aa15.98■□□□□ 0.15
VEGFA-229ENST00000621747 TRAV13-1A0A0B4J241 112 aa15.97■□□□□ 0.15
VEGFA-229ENST00000621747 Q6ZUT4 128 aa15.97■□□□□ 0.15
VEGFA-229ENST00000621747 LINC00526Q96FQ7 95 aa15.97■□□□□ 0.15
VEGFA-229ENST00000621747 PKHD1L1Q86WI1 4243 aa15.97■□□□□ 0.15
VEGFA-229ENST00000621747 COX7A2LO14548 114 aa15.96■□□□□ 0.15
VEGFA-229ENST00000621747 PNRC1Q12796 327 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-229ENST00000621747 NPYP01303 97 aa15.95■□□□□ 0.14
VEGFA-229ENST00000621747 HNRNPA3P51991 378 aaKnown RBP15.95■□□□□ 0.14
VEGFA-229ENST00000621747 ORMDL3Q8N138 153 aa15.95■□□□□ 0.14
VEGFA-229ENST00000621747 C7orf33Q8WU49 177 aa15.95■□□□□ 0.14
VEGFA-229ENST00000621747 LINC00474Q9P2X8 69 aa15.95■□□□□ 0.14
VEGFA-229ENST00000621747 SYCNQ0VAF6 134 aa15.94■□□□□ 0.14
VEGFA-229ENST00000621747 A0A096LNI7 61 aa15.93■□□□□ 0.14
VEGFA-229ENST00000621747 RPL39P62891 51 aaKnown RBP15.93■□□□□ 0.14
VEGFA-229ENST00000621747 STPG4Q8N801 248 aa15.93■□□□□ 0.14
VEGFA-229ENST00000621747 SPANXA1Q9NS26 97 aa15.93■□□□□ 0.14
VEGFA-229ENST00000621747 LRP1Q07954 4544 aaKnown RBP15.92■□□□□ 0.14
VEGFA-229ENST00000621747 TMEM136Q6ZRR5 245 aa15.92■□□□□ 0.14
VEGFA-229ENST00000621747 ANAPC16Q96DE5 110 aa15.92■□□□□ 0.14
VEGFA-229ENST00000621747 FAT3Q8TDW7 4589 aa15.92■□□□□ 0.14
VEGFA-229ENST00000621747 MT-ND4LP03901 98 aa15.91■□□□□ 0.14
VEGFA-229ENST00000621747 IGLV4-69A0A075B6H9 119 aa15.9■□□□□ 0.14
VEGFA-229ENST00000621747 APOMO95445 188 aa15.9■□□□□ 0.14
VEGFA-229ENST00000621747 PRELID3AQ96N28 172 aa15.9■□□□□ 0.14
VEGFA-229ENST00000621747 RAB5AP20339 215 aa15.89■□□□□ 0.13
VEGFA-229ENST00000621747 C5orf38Q86SI9 138 aa15.89■□□□□ 0.13
VEGFA-229ENST00000621747 MRPS36P82909 103 aaKnown RBP15.88■□□□□ 0.13
VEGFA-229ENST00000621747 Q6ZRU5 148 aa15.87■□□□□ 0.13
VEGFA-229ENST00000621747 LAMTOR2Q9Y2Q5 125 aa15.87■□□□□ 0.13
VEGFA-229ENST00000621747 C2orf48Q96LS8 159 aa15.86■□□□□ 0.13
VEGFA-229ENST00000621747 CAMK2N2Q96S95 79 aa15.86■□□□□ 0.13
VEGFA-229ENST00000621747 LOC107984640A0A0U1RRK4 108 aa15.85■□□□□ 0.13
VEGFA-229ENST00000621747 CLLU1Q5K131 121 aa15.85■□□□□ 0.13
VEGFA-229ENST00000621747 IFI27P40305 119 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-229ENST00000621747 FAM104AQ969W3 186 aa15.84■□□□□ 0.13
VEGFA-229ENST00000621747 OPRPNQ99935 248 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms