RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RPS10P46783 165 aaKnown RBP7.19□□□□□ -1.26
CPNE3-210ENST00000621245 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
CPNE3-210ENST00000621245 ALKAL2Q6UX46 152 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 BIN3Q9NQY0 253 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 A0A096LNI7 61 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 GVQW2A0A096LPI5 108 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-210ENST00000621245 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-210ENST00000621245 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 GATCO43716 136 aaKnown RBP7.18□□□□□ -1.26
CPNE3-210ENST00000621245 CEBPGP53567 150 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 TMEM242Q9NWH2 141 aa7.18□□□□□ -1.26
CPNE3-210ENST00000621245 SMKR1H3BMG3 65 aa7.17□□□□□ -1.26
CPNE3-210ENST00000621245 ESDP10768 282 aa7.17□□□□□ -1.26
CPNE3-210ENST00000621245 XCL1P47992 114 aa7.17□□□□□ -1.26
CPNE3-210ENST00000621245 MAJINQ3KP22 176 aa7.17□□□□□ -1.26
CPNE3-210ENST00000621245 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
CPNE3-210ENST00000621245 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 CCL25O15444 150 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 NCR2O95944 276 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
CPNE3-210ENST00000621245 Q6ZRU5 148 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 FAM231DQ6ZW35 169 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 LYPD6BQ8NI32 183 aa7.16□□□□□ -1.26
CPNE3-210ENST00000621245 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 I3L3M4 83 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 PRYO14603 147 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 NDUFS6O75380 124 aaKnown RBP7.15□□□□□ -1.26
CPNE3-210ENST00000621245 PMCHP20382 165 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 TAGLN2P37802 199 aaKnown RBP7.15□□□□□ -1.26
CPNE3-210ENST00000621245 STPG4Q8N801 248 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 OR5A1Q8NGJ0 315 aa7.15□□□□□ -1.26
CPNE3-210ENST00000621245 HIGD1CA8MV81 97 aa7.14□□□□□ -1.27
CPNE3-210ENST00000621245 A8MWL6 223 aa7.14□□□□□ -1.27
CPNE3-210ENST00000621245 NPSP0C0P6 89 aa7.14□□□□□ -1.27
CPNE3-210ENST00000621245 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
CPNE3-210ENST00000621245 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
CPNE3-210ENST00000621245 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
CPNE3-210ENST00000621245 H7C423 109 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 RAB4AP20338 218 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 POLR2KP53803 58 aaKnown RBP7.13□□□□□ -1.27
CPNE3-210ENST00000621245 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 AKAP14Q86UN6 197 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 SMIM7Q9BQ49 75 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 ST20Q9HBF5 79 aa7.13□□□□□ -1.27
CPNE3-210ENST00000621245 ZNF25P17030 456 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-210ENST00000621245 NRACQ8N912 160 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 MRAP2Q96G30 205 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 TMEM191AQ9H0A3 160 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 V9GYV3 84 aa7.12□□□□□ -1.27
CPNE3-210ENST00000621245 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 SRP19P09132 144 aaKnown RBP7.11□□□□□ -1.27
CPNE3-210ENST00000621245 BLOC1S1P78537 153 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 TEX261Q6UWH6 196 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 C7orf33Q8WU49 177 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
CPNE3-210ENST00000621245 IGHV1-58A0A0C4DH39 117 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 C9JQL5 133 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 Q6ZUT4 128 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 MRPL52Q86TS9 123 aaKnown RBP7.1□□□□□ -1.27
CPNE3-210ENST00000621245 ZNF664Q8N3J9 261 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 FAM210AQ96ND0 272 aa7.1□□□□□ -1.27
CPNE3-210ENST00000621245 EIF5A2Q9GZV4 153 aaKnown RBP7.1□□□□□ -1.27
CPNE3-210ENST00000621245 C7orf77A4D0Y5 90 aa7.09□□□□□ -1.27
CPNE3-210ENST00000621245 ZNF727A8MUV8 499 aa7.09□□□□□ -1.27
CPNE3-210ENST00000621245 XP32Q5T750 250 aa7.09□□□□□ -1.27
CPNE3-210ENST00000621245 OSTCQ9NRP0 149 aa7.09□□□□□ -1.27
CPNE3-210ENST00000621245 UBE2D4Q9Y2X8 147 aa7.09□□□□□ -1.27
CPNE3-210ENST00000621245 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 CAMPP49913 170 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 CD164L2Q6UWJ8 174 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 ISOC2Q96AB3 205 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
CPNE3-210ENST00000621245 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
CPNE3-210ENST00000621245 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
CPNE3-210ENST00000621245 RPL23P62829 140 aaKnown RBP7.07□□□□□ -1.28
CPNE3-210ENST00000621245 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
CPNE3-210ENST00000621245 SS18Q15532 418 aa7.07□□□□□ -1.28
CPNE3-210ENST00000621245 MRPL51Q4U2R6 128 aaKnown RBP7.07□□□□□ -1.28
CPNE3-210ENST00000621245 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
CPNE3-210ENST00000621245 GAGE2BQ13066 116 aa7.06□□□□□ -1.28
CPNE3-210ENST00000621245 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPNE3-210ENST00000621245 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
CPNE3-210ENST00000621245 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
CPNE3-210ENST00000621245 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
CPNE3-210ENST00000621245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-210ENST00000621245 COX7A2LO14548 114 aa7.05□□□□□ -1.28
CPNE3-210ENST00000621245 VCYO14598 125 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms