RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 LST1O00453 97 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 COX6B1P14854 86 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
NEB-220ENST00000618972 COX7BP24311 80 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 I3L2K1 104 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 A0A0J9YXV3 536 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 XAGE1AQ9HD64 81 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 E7EQL1 145 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 POLR2KP53803 58 aaKnown RBP2.32□□□□□ -2.04
NEB-220ENST00000618972 PROK1P58294 105 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 C2orf91Q6ZV80 131 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 Q86TA4 180 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
NEB-220ENST00000618972 UBE2D1P51668 147 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 Q8N9L7 120 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 BDP1A6H8Y1 2624 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 H3BRN7 92 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 TNS1Q9HBL0 1735 aaKnown RBP2.31□□□□□ -2.04
NEB-220ENST00000618972 Q6ZRU5 148 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 WFDC10AQ9H1F0 79 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 NHSL1Q5SYE7 1610 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 ACANP16112 2415 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 TMEM263Q8WUH6 116 aaKnown RBP2.31□□□□□ -2.04
NEB-220ENST00000618972 MYCNOSP40205 109 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 C2orf16Q68DN1 1984 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 TCF20Q9UGU0 1960 aaKnown RBP2.31□□□□□ -2.04
NEB-220ENST00000618972 IGHV7-4-1A0A0J9YVY3 117 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 MAPK1IP1LQ8NDC0 245 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 HOXB4P17483 251 aaPredicted RBP2.31□□□□□ -2.04
NEB-220ENST00000618972 BSPH1Q075Z2 132 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 IGHV3-11P01762 117 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 IGIPA6NJ69 53 aa2.31□□□□□ -2.04
NEB-220ENST00000618972 TRBV6-4A0A1B0GX49 114 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 NOTCH4Q99466 2003 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 LY6EQ16553 131 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 LECT2O14960 151 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 M0R378 163 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 LY75O60449 1722 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 Q8N814 137 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 TRBV6-8A0A0A6YYG3 113 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 BRI3O95415 125 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 Q6ZSV7 163 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 IGLV1-44P01699 117 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 PRR15Q8IV56 129 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 TNFRSF13BO14836 293 aaPredicted RBP2.3□□□□□ -2.04
NEB-220ENST00000618972 LINC01356Q8N9X3 169 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 CDIP1Q9H305 208 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 RNASE13Q5GAN3 156 aaKnown RBP2.3□□□□□ -2.04
NEB-220ENST00000618972 PLAC8L1A1L4L8 177 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 XGP55808 180 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
NEB-220ENST00000618972 CEMP1Q6PRD7 247 aaPredicted RBP2.3□□□□□ -2.04
NEB-220ENST00000618972 NTM-AS1Q6ZSK4 140 aa2.3□□□□□ -2.04
NEB-220ENST00000618972 M0QY20 66 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 ESRGQ1W209 222 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 Q6ZSN1 163 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 LINC00474Q9P2X8 69 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 NDUFA1O15239 70 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 CRIP2P52943 208 aaPredicted RBP2.29□□□□□ -2.04
NEB-220ENST00000618972 DSCAMO60469 2012 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 ETDCA0A1B0GVM5 59 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 B9D2Q9BPU9 175 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 SMCPP49901 116 aaPredicted RBP2.29□□□□□ -2.04
NEB-220ENST00000618972 PRO0255Q9UI72 69 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 IGHV3-16A0A0C4DH30 117 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 MIR7-3HGQ8N6C7 128 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 PSCAO43653 123 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 IGKV4-1P06312 121 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 K7EQD1 137 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 A0A1B0GUV1 79 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 C14orf177Q52M58 125 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 HCG22E2RYF7 251 aa2.29□□□□□ -2.04
NEB-220ENST00000618972 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 PKD1L2Q7Z442 2459 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 CLEC2BQ92478 149 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 IGLV11-55A0A075B6I3 123 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 TRIAP1O43715 76 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 DEFB130BP0DP73 79 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 DEFB130AP0DP74 79 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 C9orf116Q5BN46 136 aaPredicted RBP2.28□□□□□ -2.04
NEB-220ENST00000618972 C10orf99Q6UWK7 81 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 ANGP03950 147 aaKnown RBP2.28□□□□□ -2.04
NEB-220ENST00000618972 POM121L12Q8N7R1 296 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 EXPH5Q8NEV8 1989 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 PRR3P79522 188 aaKnown RBP2.28□□□□□ -2.04
NEB-220ENST00000618972 PHF5AQ7RTV0 110 aaKnown RBP2.28□□□□□ -2.04
NEB-220ENST00000618972 C10orf25Q5T742 122 aa2.28□□□□□ -2.04
NEB-220ENST00000618972 ANKHD1Q8IWZ3 2542 aaKnown RBP2.28□□□□□ -2.05
NEB-220ENST00000618972 FNDC1Q4ZHG4 1894 aaPredicted RBP2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms