RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 C9JQL5 133 aa14.06□□□□□ -0.16
NEDD4L-237ENST00000617539 SMKR1H3BMG3 65 aa14.06□□□□□ -0.16
NEDD4L-237ENST00000617539 XCL1P47992 114 aa14.06□□□□□ -0.16
NEDD4L-237ENST00000617539 PLAC8Q9NZF1 115 aa14.06□□□□□ -0.16
NEDD4L-237ENST00000617539 CCL25O15444 150 aa14.05□□□□□ -0.16
NEDD4L-237ENST00000617539 MRPL52Q86TS9 123 aaKnown RBP14.05□□□□□ -0.16
NEDD4L-237ENST00000617539 PRSS3P2Q8NHM4 247 aa14.05□□□□□ -0.16
NEDD4L-237ENST00000617539 BTF3L4Q96K17 158 aa14.05□□□□□ -0.16
NEDD4L-237ENST00000617539 RPL23P62829 140 aaKnown RBP14.04□□□□□ -0.16
NEDD4L-237ENST00000617539 NRACQ8N912 160 aa14.04□□□□□ -0.16
NEDD4L-237ENST00000617539 DPH3Q96FX2 82 aa14.04□□□□□ -0.16
NEDD4L-237ENST00000617539 TMEM101Q96IK0 257 aa14.04□□□□□ -0.16
NEDD4L-237ENST00000617539 CDC42SE2Q9NRR3 84 aa14.04□□□□□ -0.16
NEDD4L-237ENST00000617539 RIGQ13278 110 aa14.02□□□□□ -0.17
NEDD4L-237ENST00000617539 TMEM241Q24JQ0 296 aa14.02□□□□□ -0.17
NEDD4L-237ENST00000617539 C7orf77A4D0Y5 90 aa14.01□□□□□ -0.17
NEDD4L-237ENST00000617539 SRSF3P84103 164 aaKnown RBP14.01□□□□□ -0.17
NEDD4L-237ENST00000617539 LINC00526Q96FQ7 95 aa14.01□□□□□ -0.17
NEDD4L-237ENST00000617539 IGKV2-24A0A0C4DH68 120 aa14□□□□□ -0.17
NEDD4L-237ENST00000617539 FAM74A3Q4VXF1 159 aa14□□□□□ -0.17
NEDD4L-237ENST00000617539 SERTAD4-AS1Q5TG53 156 aa14□□□□□ -0.17
NEDD4L-237ENST00000617539 ZNF664Q8N3J9 261 aa14□□□□□ -0.17
NEDD4L-237ENST00000617539 A0A096LNI7 61 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 PHOX2AO14813 284 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 MT1HL1P0DM35 61 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 ADIRFQ15847 76 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 MAJINQ3KP22 176 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 NAT8BQ9UHF3 227 aa13.99□□□□□ -0.17
NEDD4L-237ENST00000617539 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
NEDD4L-237ENST00000617539 SMIM27A0A1W2PRY6 76 aa13.98□□□□□ -0.17
NEDD4L-237ENST00000617539 VCYO14598 125 aa13.98□□□□□ -0.17
NEDD4L-237ENST00000617539 SUMO2P61956 95 aaKnown RBP13.98□□□□□ -0.17
NEDD4L-237ENST00000617539 SS18Q15532 418 aa13.97□□□□□ -0.17
NEDD4L-237ENST00000617539 MRPL51Q4U2R6 128 aaKnown RBP13.97□□□□□ -0.17
NEDD4L-237ENST00000617539 FAM104BQ5XKR9 115 aa13.97□□□□□ -0.17
NEDD4L-237ENST00000617539 CD164L2Q6UWJ8 174 aa13.97□□□□□ -0.17
NEDD4L-237ENST00000617539 NAT8Q9UHE5 227 aa13.97□□□□□ -0.17
NEDD4L-237ENST00000617539 FCER1GP30273 86 aa13.96□□□□□ -0.17
NEDD4L-237ENST00000617539 Q6ZRU5 148 aa13.96□□□□□ -0.17
NEDD4L-237ENST00000617539 UBE2D4Q9Y2X8 147 aa13.96□□□□□ -0.17
NEDD4L-237ENST00000617539 RNASE13Q5GAN3 156 aaKnown RBP13.95□□□□□ -0.18
NEDD4L-237ENST00000617539 STPG4Q8N801 248 aa13.95□□□□□ -0.18
NEDD4L-237ENST00000617539 CSDC2Q9Y534 153 aaKnown RBP13.95□□□□□ -0.18
NEDD4L-237ENST00000617539 PPP1R17O96001 155 aa13.94□□□□□ -0.18
NEDD4L-237ENST00000617539 CARD19Q96LW7 228 aa13.94□□□□□ -0.18
NEDD4L-237ENST00000617539 CAMPP49913 170 aa13.93□□□□□ -0.18
NEDD4L-237ENST00000617539 C7orf33Q8WU49 177 aa13.93□□□□□ -0.18
NEDD4L-237ENST00000617539 Q6ZUT4 128 aa13.92□□□□□ -0.18
NEDD4L-237ENST00000617539 KIR2DL4Q99706 377 aa13.92□□□□□ -0.18
NEDD4L-237ENST00000617539 PPP1R2P9O14990 202 aa13.91□□□□□ -0.18
NEDD4L-237ENST00000617539 PEA15Q15121 130 aa13.91□□□□□ -0.18
NEDD4L-237ENST00000617539 UBR4Q5T4S7 5183 aa13.91□□□□□ -0.18
NEDD4L-237ENST00000617539 TRBV24-1A0A075B6N3 115 aa13.9□□□□□ -0.18
NEDD4L-237ENST00000617539 C1orf196B1AJZ1 125 aa13.9□□□□□ -0.18
NEDD4L-237ENST00000617539 PRR3P79522 188 aaKnown RBP13.9□□□□□ -0.18
NEDD4L-237ENST00000617539 SYCNQ0VAF6 134 aa13.9□□□□□ -0.18
NEDD4L-237ENST00000617539 C20orf78Q9BR46 151 aa13.9□□□□□ -0.18
NEDD4L-237ENST00000617539 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
NEDD4L-237ENST00000617539 ZNF561-AS1K7EIQ3 104 aa13.89□□□□□ -0.19
NEDD4L-237ENST00000617539 FAM104AQ969W3 186 aa13.89□□□□□ -0.19
NEDD4L-237ENST00000617539 IGLV4-69A0A075B6H9 119 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 A0A1B0GW15 77 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 A0A1B0GXF2 115 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 CKS2P33552 79 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 RPL32P62910 135 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 MRPL54Q6P161 138 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 TIMM21Q9BVV7 248 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 SMDT1Q9H4I9 107 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 PLA2G2DQ9UNK4 145 aa13.88□□□□□ -0.19
NEDD4L-237ENST00000617539 TRAV13-1A0A0B4J241 112 aa13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 COX7A2LO14548 114 aa13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 TNFRSF6BO95407 300 aa13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 RPL39P62891 51 aaKnown RBP13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 LINC00474Q9P2X8 69 aa13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 TNXBP22105 4242 aa13.87□□□□□ -0.19
NEDD4L-237ENST00000617539 HBBP68871 147 aa13.86□□□□□ -0.19
NEDD4L-237ENST00000617539 SMAGPQ0VAQ4 97 aa13.86□□□□□ -0.19
NEDD4L-237ENST00000617539 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
NEDD4L-237ENST00000617539 D6R8Y8 96 aa13.85□□□□□ -0.19
NEDD4L-237ENST00000617539 NPYP01303 97 aa13.85□□□□□ -0.19
NEDD4L-237ENST00000617539 MALP21145 153 aa13.85□□□□□ -0.19
NEDD4L-237ENST00000617539 PKIGQ9Y2B9 76 aa13.85□□□□□ -0.19
NEDD4L-237ENST00000617539 PTTG1IPP53801 180 aa13.84□□□□□ -0.19
NEDD4L-237ENST00000617539 C5orf38Q86SI9 138 aa13.84□□□□□ -0.19
NEDD4L-237ENST00000617539 TMEM18Q96B42 140 aa13.83□□□□□ -0.2
NEDD4L-237ENST00000617539 OPRPNQ99935 248 aaPredicted RBP13.82□□□□□ -0.2
NEDD4L-237ENST00000617539 LOC107984640A0A0U1RRK4 108 aa13.81□□□□□ -0.2
NEDD4L-237ENST00000617539 F8W036 122 aa13.81□□□□□ -0.2
NEDD4L-237ENST00000617539 CAMK2N2Q96S95 79 aa13.81□□□□□ -0.2
NEDD4L-237ENST00000617539 TCAPO15273 167 aa13.8□□□□□ -0.2
NEDD4L-237ENST00000617539 S100A8P05109 93 aa13.8□□□□□ -0.2
NEDD4L-237ENST00000617539 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
NEDD4L-237ENST00000617539 GAGE2BQ13066 116 aa13.79□□□□□ -0.2
NEDD4L-237ENST00000617539 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
NEDD4L-237ENST00000617539 A0A1W2PNN7 141 aa13.78□□□□□ -0.2
NEDD4L-237ENST00000617539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.78□□□□□ -0.2
NEDD4L-237ENST00000617539 APOMO95445 188 aa13.78□□□□□ -0.2
NEDD4L-237ENST00000617539 PPBPP02775 128 aa13.78□□□□□ -0.2
NEDD4L-237ENST00000617539 SPAG11BQ08648 103 aa13.78□□□□□ -0.2
NEDD4L-237ENST00000617539 IGHV3OR16-9A0A0B4J2B5 98 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms