RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 FCER1GP30273 86 aa11.02□□□□□ -0.65
LHX1-202ENST00000616237 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
LHX1-202ENST00000616237 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
LHX1-202ENST00000616237 BTF3L4Q96K17 158 aa11.02□□□□□ -0.65
LHX1-202ENST00000616237 SLPIP03973 132 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 Q5VSD8 79 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 DGAT2L7PQ6IED9 249 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 CLRN3Q8NCR9 226 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
LHX1-202ENST00000616237 C9orf163Q8N9P6 203 aa11□□□□□ -0.65
LHX1-202ENST00000616237 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
LHX1-202ENST00000616237 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
LHX1-202ENST00000616237 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
LHX1-202ENST00000616237 PPBPP02775 128 aa10.99□□□□□ -0.65
LHX1-202ENST00000616237 FOXI1Q12951 378 aa10.99□□□□□ -0.65
LHX1-202ENST00000616237 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
LHX1-202ENST00000616237 ZNF664Q8N3J9 261 aa10.99□□□□□ -0.65
LHX1-202ENST00000616237 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
LHX1-202ENST00000616237 PHOX2AO14813 284 aa10.98□□□□□ -0.65
LHX1-202ENST00000616237 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
LHX1-202ENST00000616237 COMMD7Q86VX2 200 aa10.98□□□□□ -0.65
LHX1-202ENST00000616237 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
LHX1-202ENST00000616237 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
LHX1-202ENST00000616237 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
LHX1-202ENST00000616237 PRELID3AQ96N28 172 aa10.97□□□□□ -0.65
LHX1-202ENST00000616237 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
LHX1-202ENST00000616237 SEC11CQ9BY50 192 aa10.97□□□□□ -0.65
LHX1-202ENST00000616237 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
LHX1-202ENST00000616237 TCAPO15273 167 aa10.96□□□□□ -0.65
LHX1-202ENST00000616237 CCL25O15444 150 aa10.96□□□□□ -0.65
LHX1-202ENST00000616237 XCL1P47992 114 aa10.96□□□□□ -0.65
LHX1-202ENST00000616237 RPL39P62891 51 aaKnown RBP10.96□□□□□ -0.65
LHX1-202ENST00000616237 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
LHX1-202ENST00000616237 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
LHX1-202ENST00000616237 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
LHX1-202ENST00000616237 Q6ZUT4 128 aa10.95□□□□□ -0.66
LHX1-202ENST00000616237 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
LHX1-202ENST00000616237 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
LHX1-202ENST00000616237 PANO1I0J062 215 aa10.94□□□□□ -0.66
LHX1-202ENST00000616237 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
LHX1-202ENST00000616237 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
LHX1-202ENST00000616237 FAM229AH3BQW9 127 aa10.93□□□□□ -0.66
LHX1-202ENST00000616237 C10orf91Q5T1B1 145 aa10.93□□□□□ -0.66
LHX1-202ENST00000616237 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
LHX1-202ENST00000616237 CTDSP1Q9GZU7 261 aa10.93□□□□□ -0.66
LHX1-202ENST00000616237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
LHX1-202ENST00000616237 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
LHX1-202ENST00000616237 SS18Q15532 418 aa10.92□□□□□ -0.66
LHX1-202ENST00000616237 AP5S1Q9NUS5 200 aa10.92□□□□□ -0.66
LHX1-202ENST00000616237 GVQW2A0A096LPI5 108 aaPredicted RBP10.91□□□□□ -0.66
LHX1-202ENST00000616237 LOC389332A0A1B0GUA5 103 aa10.91□□□□□ -0.66
LHX1-202ENST00000616237 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
LHX1-202ENST00000616237 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
LHX1-202ENST00000616237 TMEM18Q96B42 140 aa10.91□□□□□ -0.66
LHX1-202ENST00000616237 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
LHX1-202ENST00000616237 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
LHX1-202ENST00000616237 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
LHX1-202ENST00000616237 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
LHX1-202ENST00000616237 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.67
LHX1-202ENST00000616237 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.67
LHX1-202ENST00000616237 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.67
LHX1-202ENST00000616237 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.67
LHX1-202ENST00000616237 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
LHX1-202ENST00000616237 C1orf196B1AJZ1 125 aa10.89□□□□□ -0.67
LHX1-202ENST00000616237 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
LHX1-202ENST00000616237 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
LHX1-202ENST00000616237 IGHV3-64A0A075B6Q5 118 aa10.88□□□□□ -0.67
LHX1-202ENST00000616237 TRAV9-1A0A075B6T8 112 aa10.88□□□□□ -0.67
LHX1-202ENST00000616237 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.88□□□□□ -0.67
LHX1-202ENST00000616237 IGHV1-58A0A0C4DH39 117 aa10.88□□□□□ -0.67
LHX1-202ENST00000616237 RAB5AP20339 215 aa10.88□□□□□ -0.67
LHX1-202ENST00000616237 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
LHX1-202ENST00000616237 CIRBPQ14011 172 aaKnown RBP10.88□□□□□ -0.67
LHX1-202ENST00000616237 Q8N8P6 123 aa10.88□□□□□ -0.67
LHX1-202ENST00000616237 CHTF8P0CG12 524 aa10.87□□□□□ -0.67
LHX1-202ENST00000616237 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
LHX1-202ENST00000616237 KRTAP10-4P60372 401 aaPredicted RBP10.86□□□□□ -0.67
LHX1-202ENST00000616237 COX7A2LO14548 114 aa10.84□□□□□ -0.67
LHX1-202ENST00000616237 COX6A2Q02221 97 aa10.84□□□□□ -0.67
LHX1-202ENST00000616237 C5orf38Q86SI9 138 aa10.84□□□□□ -0.67
LHX1-202ENST00000616237 PRSS3P2Q8NHM4 247 aa10.84□□□□□ -0.67
LHX1-202ENST00000616237 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
LHX1-202ENST00000616237 IGLV4-3A0A075B6K6 122 aa10.83□□□□□ -0.68
LHX1-202ENST00000616237 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
LHX1-202ENST00000616237 S100PP25815 95 aa10.83□□□□□ -0.68
LHX1-202ENST00000616237 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
LHX1-202ENST00000616237 RHEBQ15382 184 aa10.83□□□□□ -0.68
LHX1-202ENST00000616237 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
LHX1-202ENST00000616237 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
LHX1-202ENST00000616237 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
LHX1-202ENST00000616237 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
LHX1-202ENST00000616237 IFITM10A6NMD0 228 aa10.81□□□□□ -0.68
LHX1-202ENST00000616237 MALP21145 153 aa10.81□□□□□ -0.68
LHX1-202ENST00000616237 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
LHX1-202ENST00000616237 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
LHX1-202ENST00000616237 A0A087WYN8 130 aa10.8□□□□□ -0.68
LHX1-202ENST00000616237 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms