RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 GAGE4Q13068 117 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 GAGE5Q13069 117 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 MRPL35Q9NZE8 188 aaKnown RBP7.55□□□□□ -1.2
COL4A1-205ENST00000615732 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 IGIPA6NJ69 53 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 PMVKQ15126 192 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 PAPPA-AS1Q5QFB9 102 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 SLC25A34Q6PIV7 304 aa7.54□□□□□ -1.2
COL4A1-205ENST00000615732 DAZ4Q86SG3 579 aaKnown RBP7.54□□□□□ -1.2
COL4A1-205ENST00000615732 DAZ3Q9NR90 486 aaKnown RBP7.54□□□□□ -1.2
COL4A1-205ENST00000615732 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 TCTAP57738 103 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 FAM222AQ5U5X8 452 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 STPG4Q8N801 248 aa7.53□□□□□ -1.2
COL4A1-205ENST00000615732 NMUP48645 174 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 UBE2D3P61077 147 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 DAD1P61803 113 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 UBE2D2P62837 147 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 CHCHD7Q9BUK0 85 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 Q9UF83 564 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 HSPG2P98160 4391 aa7.52□□□□□ -1.21
COL4A1-205ENST00000615732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
COL4A1-205ENST00000615732 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
COL4A1-205ENST00000615732 M0R2N4 97 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 COX8AP10176 69 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 FHL2Q14192 279 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 LINC00336Q6ZUF6 198 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
COL4A1-205ENST00000615732 VCX2Q9H322 139 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 CST9LQ9H4G1 147 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
COL4A1-205ENST00000615732 IGLV4-3A0A075B6K6 122 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 TEX48A0A1B0GUV7 120 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 M0R143 59 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 UBE2L6O14933 153 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 NPSP0C0P6 89 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 HERVK_113P61574 105 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 CTAG1AP78358 180 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
COL4A1-205ENST00000615732 LOC100131303A0A0U1RQF7 123 aa7.49□□□□□ -1.21
COL4A1-205ENST00000615732 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
COL4A1-205ENST00000615732 TMEM243Q9BU79 118 aa7.49□□□□□ -1.21
COL4A1-205ENST00000615732 MRPS16Q9Y3D3 137 aaKnown RBP7.49□□□□□ -1.21
COL4A1-205ENST00000615732 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 GYPEP15421 78 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 CRYBA4P53673 196 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 BATFQ16520 125 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 OPRPNQ99935 248 aaPredicted RBP7.48□□□□□ -1.21
COL4A1-205ENST00000615732 GTSF1LQ9H1H1 148 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 UBE2D4Q9Y2X8 147 aa7.48□□□□□ -1.21
COL4A1-205ENST00000615732 IGLV4-69A0A075B6H9 119 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 C11orf86A6NJI1 115 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 RTL8CO15255 209 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 PAX4O43316 350 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 ATP5G1P05496 136 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 AMMECR1LQ6DCA0 310 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 Q6ZUT4 128 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 CHAC1Q9BUX1 264 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
COL4A1-205ENST00000615732 EREGO14944 169 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 DLEU1O43261 78 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 HTN3P15516 51 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.22
COL4A1-205ENST00000615732 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 OR5A1Q8NGJ0 315 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 TMEM101Q96IK0 257 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 AMELXQ99217 191 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 SNHG12Q9BXW3 62 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
COL4A1-205ENST00000615732 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 F5H768 121 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 H7C423 109 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 FGF6P10767 208 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
COL4A1-205ENST00000615732 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
COL4A1-205ENST00000615732 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 NFE4Q86UQ8 179 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms