RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	KIR2DL4	Q99706	377 aa		10.84	□□□□□ -0.67
CCND3-222	ENST00000612455	CDC42SE2	Q9NRR3	84 aa		10.84	□□□□□ -0.67
CCND3-222	ENST00000612455	C9orf163	Q8N9P6	203 aa		10.83	□□□□□ -0.68
CCND3-222	ENST00000612455	CSDC2	Q9Y534	153 aa	Known RBP	10.83	□□□□□ -0.68
CCND3-222	ENST00000612455	GAGE12H	A6NDE8	117 aa		10.82	□□□□□ -0.68
CCND3-222	ENST00000612455	EPM2A	B3EWF7	344 aa		10.82	□□□□□ -0.68
CCND3-222	ENST00000612455	FCER1G	P30273	86 aa		10.82	□□□□□ -0.68
CCND3-222	ENST00000612455	HAMP	P81172	84 aa		10.82	□□□□□ -0.68
CCND3-222	ENST00000612455	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.82	□□□□□ -0.68
CCND3-222	ENST00000612455	VPS13B	Q7Z7G8	4022 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	IGKV3OR2-268	A0A0C4DH90	116 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	LINC00959	A0A1B0GUT2	108 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	PRSS47	A8MTI9	375 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	TCAP	O15273	167 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	NPY	P01303	97 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	SMR3B	P02814	79 aa	Predicted RBP	10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	ZNF664	Q8N3J9	261 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	IMMP2L	Q96T52	175 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	SMIM2	Q9BVW6	85 aa		10.81	□□□□□ -0.68
CCND3-222	ENST00000612455	CNBP	P62633	177 aa	Known RBP	10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	TMEM136	Q6ZRR5	245 aa		10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	ORMDL3	Q8N138	153 aa		10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	TIMM21	Q9BVV7	248 aa		10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	SEC11C	Q9BY50	192 aa		10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	UBE2D4	Q9Y2X8	147 aa		10.8	□□□□□ -0.68
CCND3-222	ENST00000612455	SLPI	P03973	132 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455	SMAGP	Q0VAQ4	97 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455	FOXI1	Q12951	378 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455	CFAP161	Q6P656	301 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455	C15orf56	Q8N910	161 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455	CTDSP1	Q9GZU7	261 aa		10.79	□□□□□ -0.68
CCND3-222	ENST00000612455		Q5VSD8	79 aa		10.78	□□□□□ -0.68
CCND3-222	ENST00000612455	TMEM18	Q96B42	140 aa		10.78	□□□□□ -0.68
CCND3-222	ENST00000612455	PRELID3A	Q96N28	172 aa		10.78	□□□□□ -0.68
CCND3-222	ENST00000612455	CHAC1	Q9BUX1	264 aa		10.78	□□□□□ -0.68
CCND3-222	ENST00000612455	hDV102S1	A0JD36	115 aa		10.77	□□□□□ -0.69
CCND3-222	ENST00000612455	C10orf91	Q5T1B1	145 aa		10.77	□□□□□ -0.69
CCND3-222	ENST00000612455	SDIM1	Q6ZPB5	146 aa		10.77	□□□□□ -0.69
CCND3-222	ENST00000612455	COMMD7	Q86VX2	200 aa		10.77	□□□□□ -0.69
CCND3-222	ENST00000612455	LAMTOR2	Q9Y2Q5	125 aa		10.77	□□□□□ -0.69
CCND3-222	ENST00000612455	FAM229A	H3BQW9	127 aa		10.76	□□□□□ -0.69
CCND3-222	ENST00000612455	CCL25	O15444	150 aa		10.76	□□□□□ -0.69
CCND3-222	ENST00000612455	SS18	Q15532	418 aa		10.76	□□□□□ -0.69
CCND3-222	ENST00000612455	SCX	Q7RTU7	201 aa		10.76	□□□□□ -0.69
CCND3-222	ENST00000612455	FAM104A	Q969W3	186 aa		10.76	□□□□□ -0.69
CCND3-222	ENST00000612455	SRRM2	Q9UQ35	2752 aa	Known RBP	10.75	□□□□□ -0.69
CCND3-222	ENST00000612455	CD164L2	Q6UWJ8	174 aa		10.75	□□□□□ -0.69
CCND3-222	ENST00000612455	CIRBP-AS1	Q8TBR5	109 aa		10.75	□□□□□ -0.69
CCND3-222	ENST00000612455	AP5S1	Q9NUS5	200 aa		10.75	□□□□□ -0.69
CCND3-222	ENST00000612455	TRAV9-1	A0A075B6T8	112 aa		10.74	□□□□□ -0.69
CCND3-222	ENST00000612455	XCL1	P47992	114 aa		10.74	□□□□□ -0.69
CCND3-222	ENST00000612455	RPL39	P62891	51 aa	Known RBP	10.74	□□□□□ -0.69
CCND3-222	ENST00000612455	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.73	□□□□□ -0.69
CCND3-222	ENST00000612455	C1orf196	B1AJZ1	125 aa		10.73	□□□□□ -0.69
CCND3-222	ENST00000612455	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.72	□□□□□ -0.69
CCND3-222	ENST00000612455	MRPS36	P82909	103 aa	Known RBP	10.72	□□□□□ -0.69
CCND3-222	ENST00000612455	SPANXA1	Q9NS26	97 aa		10.72	□□□□□ -0.69
CCND3-222	ENST00000612455	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.72	□□□□□ -0.69
CCND3-222	ENST00000612455	RAB5A	P20339	215 aa		10.71	□□□□□ -0.69
CCND3-222	ENST00000612455	CIRBP	Q14011	172 aa	Known RBP	10.71	□□□□□ -0.69
CCND3-222	ENST00000612455	HIGD2B	Q4VC39	106 aa		10.71	□□□□□ -0.69
CCND3-222	ENST00000612455	RNASE13	Q5GAN3	156 aa	Known RBP	10.71	□□□□□ -0.69
CCND3-222	ENST00000612455		Q6ZUT4	128 aa		10.71	□□□□□ -0.69
CCND3-222	ENST00000612455	IGHV3-64	A0A075B6Q5	118 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	IGHV1-58	A0A0C4DH39	117 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	INAFM2	P0DMQ5	153 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455		Q8N8P6	123 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	MAP1LC3A	Q9H492	121 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	PYGO1	Q9Y3Y4	419 aa		10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.7	□□□□□ -0.7
CCND3-222	ENST00000612455	LOC389332	A0A1B0GUA5	103 aa		10.69	□□□□□ -0.7
CCND3-222	ENST00000612455	PANO1	I0J062	215 aa		10.69	□□□□□ -0.7
CCND3-222	ENST00000612455	LINC00528	Q8N1L1	170 aa		10.69	□□□□□ -0.7
CCND3-222	ENST00000612455	TRAV13-1	A0A0B4J241	112 aa		10.68	□□□□□ -0.7
CCND3-222	ENST00000612455	OPRPN	Q99935	248 aa	Predicted RBP	10.68	□□□□□ -0.7
CCND3-222	ENST00000612455		K7EMI3	77 aa		10.67	□□□□□ -0.7
CCND3-222	ENST00000612455	GNB1L	Q9BYB4	327 aa		10.67	□□□□□ -0.7
CCND3-222	ENST00000612455	COX7A2L	O14548	114 aa		10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	PLA2G1B	P04054	148 aa	Known RBP	10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	S100P	P25815	95 aa		10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	KRTAP10-4	P60372	401 aa	Predicted RBP	10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	RHEB	Q15382	184 aa		10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	NXT2	Q9NPJ8	142 aa	Known RBP	10.66	□□□□□ -0.7
CCND3-222	ENST00000612455	KIAA1644	Q3SXP7	199 aa		10.65	□□□□□ -0.7
CCND3-222	ENST00000612455	COX19	Q49B96	90 aa		10.65	□□□□□ -0.7
CCND3-222	ENST00000612455	FLG2	Q5D862	2391 aa	Predicted RBP	10.65	□□□□□ -0.71
CCND3-222	ENST00000612455	IGLV4-3	A0A075B6K6	122 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	IFI27	P40305	119 aa	Predicted RBP	10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	COX6A2	Q02221	97 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	ORMDL2	Q53FV1	153 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	LINC00526	Q96FQ7	95 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	RPS10P5	Q9NQ39	176 aa		10.64	□□□□□ -0.71
CCND3-222	ENST00000612455	ZNF561-AS1	K7EIQ3	104 aa		10.63	□□□□□ -0.71
CCND3-222	ENST00000612455	C2orf66	Q6UXQ4	117 aa		10.63	□□□□□ -0.71
CCND3-222	ENST00000612455	C5orf38	Q86SI9	138 aa		10.63	□□□□□ -0.71
CCND3-222	ENST00000612455	PRSS3P2	Q8NHM4	247 aa		10.63	□□□□□ -0.71
CCND3-222	ENST00000612455	SPACA4	Q8TDM5	124 aa		10.63	□□□□□ -0.71
CCND3-222	ENST00000612455	NPS	P0C0P6	89 aa		10.62	□□□□□ -0.71
CCND3-222	ENST00000612455	MAL	P21145	153 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms