RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	CD164L2	Q6UWJ8	174 aa		12.94	□□□□□ -0.34
NECAB3-222	ENST00000607805	MRPL52	Q86TS9	123 aa	Known RBP	12.94	□□□□□ -0.34
NECAB3-222	ENST00000607805	BTF3L4	Q96K17	158 aa		12.94	□□□□□ -0.34
NECAB3-222	ENST00000607805	CDC42SE2	Q9NRR3	84 aa		12.94	□□□□□ -0.34
NECAB3-222	ENST00000607805	PMCH	P20382	165 aa		12.93	□□□□□ -0.34
NECAB3-222	ENST00000607805	SMIM15	Q7Z3B0	74 aa		12.93	□□□□□ -0.34
NECAB3-222	ENST00000607805	TMEM101	Q96IK0	257 aa		12.93	□□□□□ -0.34
NECAB3-222	ENST00000607805	FAM210A	Q96ND0	272 aa		12.93	□□□□□ -0.34
NECAB3-222	ENST00000607805	POLR2K	P53803	58 aa	Known RBP	12.92	□□□□□ -0.34
NECAB3-222	ENST00000607805	SLC51B	Q86UW2	128 aa		12.92	□□□□□ -0.34
NECAB3-222	ENST00000607805	hCG_2014768	A0A024R1R8	64 aa		12.91	□□□□□ -0.34
NECAB3-222	ENST00000607805	TAGLN2	P37802	199 aa	Known RBP	12.91	□□□□□ -0.34
NECAB3-222	ENST00000607805	SS18	Q15532	418 aa		12.91	□□□□□ -0.34
NECAB3-222	ENST00000607805	AKAP14	Q86UN6	197 aa		12.91	□□□□□ -0.34
NECAB3-222	ENST00000607805		A0A1W2PNN7	141 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	ZNF561-AS1	K7EIQ3	104 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	CAMP	P49913	170 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	FAM231D	Q6ZW35	169 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	MRAP2	Q96G30	205 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	TMEM242	Q9NWH2	141 aa		12.9	□□□□□ -0.34
NECAB3-222	ENST00000607805	TRBV27	A0A0K0K1C4	114 aa		12.89	□□□□□ -0.35
NECAB3-222	ENST00000607805	LOC107984640	A0A0U1RRK4	108 aa		12.89	□□□□□ -0.35
NECAB3-222	ENST00000607805	ZNF664	Q8N3J9	261 aa		12.89	□□□□□ -0.35
NECAB3-222	ENST00000607805	ST20	Q9HBF5	79 aa		12.89	□□□□□ -0.35
NECAB3-222	ENST00000607805	IGLV4-69	A0A075B6H9	119 aa		12.88	□□□□□ -0.35
NECAB3-222	ENST00000607805	NUP35	Q8NFH5	326 aa		12.88	□□□□□ -0.35
NECAB3-222	ENST00000607805		A8MWL6	223 aa		12.87	□□□□□ -0.35
NECAB3-222	ENST00000607805	GATC	O43716	136 aa	Known RBP	12.87	□□□□□ -0.35
NECAB3-222	ENST00000607805	PSORS1C2	Q9UIG4	136 aa		12.87	□□□□□ -0.35
NECAB3-222	ENST00000607805	GAGE2B	Q13066	116 aa		12.86	□□□□□ -0.35
NECAB3-222	ENST00000607805	CT83	Q5H943	113 aa		12.86	□□□□□ -0.35
NECAB3-222	ENST00000607805	ISOC2	Q96AB3	205 aa		12.86	□□□□□ -0.35
NECAB3-222	ENST00000607805	TMEM191A	Q9H0A3	160 aa		12.85	□□□□□ -0.35
NECAB3-222	ENST00000607805	C7orf77	A4D0Y5	90 aa		12.84	□□□□□ -0.35
NECAB3-222	ENST00000607805	TMEM250	H0YL14	139 aa		12.84	□□□□□ -0.35
NECAB3-222	ENST00000607805	CSDC2	Q9Y534	153 aa	Known RBP	12.84	□□□□□ -0.35
NECAB3-222	ENST00000607805	C1orf196	B1AJZ1	125 aa		12.83	□□□□□ -0.36
NECAB3-222	ENST00000607805	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.83	□□□□□ -0.36
NECAB3-222	ENST00000607805	RAB4A	P20338	218 aa		12.83	□□□□□ -0.36
NECAB3-222	ENST00000607805	C2orf48	Q96LS8	159 aa		12.83	□□□□□ -0.36
NECAB3-222	ENST00000607805	COX7A2L	O14548	114 aa		12.82	□□□□□ -0.36
NECAB3-222	ENST00000607805	APOM	O95445	188 aa		12.82	□□□□□ -0.36
NECAB3-222	ENST00000607805	C9orf116	Q5BN46	136 aa	Predicted RBP	12.82	□□□□□ -0.36
NECAB3-222	ENST00000607805		A0A1B0GUT8	65 aa		12.81	□□□□□ -0.36
NECAB3-222	ENST00000607805	UBE2D4	Q9Y2X8	147 aa		12.81	□□□□□ -0.36
NECAB3-222	ENST00000607805	MAL	P21145	153 aa		12.8	□□□□□ -0.36
NECAB3-222	ENST00000607805	CAMK2N2	Q96S95	79 aa		12.8	□□□□□ -0.36
NECAB3-222	ENST00000607805	MUC2	Q02817	5179 aa		12.8	□□□□□ -0.36
NECAB3-222	ENST00000607805	HIGD1C	A8MV81	97 aa		12.79	□□□□□ -0.36
NECAB3-222	ENST00000607805	MT-ND6	P03923	174 aa		12.79	□□□□□ -0.36
NECAB3-222	ENST00000607805	PHF5A	Q7RTV0	110 aa	Known RBP	12.79	□□□□□ -0.36
NECAB3-222	ENST00000607805	RNF151	Q2KHN1	245 aa		12.78	□□□□□ -0.36
NECAB3-222	ENST00000607805	AMN1	Q8IY45	258 aa		12.78	□□□□□ -0.36
NECAB3-222	ENST00000607805	NRAC	Q8N912	160 aa		12.78	□□□□□ -0.36
NECAB3-222	ENST00000607805	TSKU	Q8WUA8	353 aa		12.78	□□□□□ -0.36
NECAB3-222	ENST00000607805	VCY	O14598	125 aa		12.77	□□□□□ -0.37
NECAB3-222	ENST00000607805	RNASE13	Q5GAN3	156 aa	Known RBP	12.77	□□□□□ -0.37
NECAB3-222	ENST00000607805	C1orf137	Q5JT78	98 aa		12.77	□□□□□ -0.37
NECAB3-222	ENST00000607805	ALKAL2	Q6UX46	152 aa		12.77	□□□□□ -0.37
NECAB3-222	ENST00000607805	BORCS7	Q96B45	105 aa		12.77	□□□□□ -0.37
NECAB3-222	ENST00000607805	SMKR1	H3BMG3	65 aa		12.76	□□□□□ -0.37
NECAB3-222	ENST00000607805	BLOC1S1	P78537	153 aa		12.76	□□□□□ -0.37
NECAB3-222	ENST00000607805	C5orf38	Q86SI9	138 aa		12.76	□□□□□ -0.37
NECAB3-222	ENST00000607805	OPRPN	Q99935	248 aa	Predicted RBP	12.76	□□□□□ -0.37
NECAB3-222	ENST00000607805	TRAV13-1	A0A0B4J241	112 aa		12.75	□□□□□ -0.37
NECAB3-222	ENST00000607805	RPL18A	Q02543	176 aa	Known RBP	12.75	□□□□□ -0.37
NECAB3-222	ENST00000607805	FAM104A	Q969W3	186 aa		12.75	□□□□□ -0.37
NECAB3-222	ENST00000607805	TIMM21	Q9BVV7	248 aa		12.75	□□□□□ -0.37
NECAB3-222	ENST00000607805	SUMO2	P61956	95 aa	Known RBP	12.74	□□□□□ -0.37
NECAB3-222	ENST00000607805		Q6ZUT4	128 aa		12.74	□□□□□ -0.37
NECAB3-222	ENST00000607805	LINC01551	Q86U37	167 aa		12.74	□□□□□ -0.37
NECAB3-222	ENST00000607805	KRTAP11-1	Q8IUC1	163 aa		12.74	□□□□□ -0.37
NECAB3-222	ENST00000607805	OSTC	Q9NRP0	149 aa		12.74	□□□□□ -0.37
NECAB3-222	ENST00000607805		A0A1B0GVG6	124 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	IGLV7-43	P04211	117 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	FCER1G	P30273	86 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	SPAG11B	Q08648	103 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	SMAGP	Q0VAQ4	97 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	PRR26	Q8N8Z3	221 aa		12.73	□□□□□ -0.37
NECAB3-222	ENST00000607805	OR10D4P	Q8NGN7	298 aa		12.72	□□□□□ -0.37
NECAB3-222	ENST00000607805	DIRC1	Q969H9	104 aa		12.72	□□□□□ -0.37
NECAB3-222	ENST00000607805	MRPL35	Q9NZE8	188 aa	Known RBP	12.72	□□□□□ -0.37
NECAB3-222	ENST00000607805	PPP1R17	O96001	155 aa		12.71	□□□□□ -0.37
NECAB3-222	ENST00000607805		F8WDY8	70 aa		12.7	□□□□□ -0.38
NECAB3-222	ENST00000607805	KIR2DL4	Q99706	377 aa		12.7	□□□□□ -0.38
NECAB3-222	ENST00000607805	SMIM7	Q9BQ49	75 aa		12.7	□□□□□ -0.38
NECAB3-222	ENST00000607805		V9GYV3	84 aa		12.7	□□□□□ -0.38
NECAB3-222	ENST00000607805	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.69	□□□□□ -0.38
NECAB3-222	ENST00000607805		H0Y9J4	135 aa		12.69	□□□□□ -0.38
NECAB3-222	ENST00000607805	KRTAP1-4	P0C5Y4	121 aa		12.69	□□□□□ -0.38
NECAB3-222	ENST00000607805	TLX1NB	P0CAT3	122 aa		12.69	□□□□□ -0.38
NECAB3-222	ENST00000607805	CEBPG	P53567	150 aa		12.69	□□□□□ -0.38
NECAB3-222	ENST00000607805	FAM168B	A1KXE4	195 aa		12.68	□□□□□ -0.38
NECAB3-222	ENST00000607805	PPP1R2P9	O14990	202 aa		12.68	□□□□□ -0.38
NECAB3-222	ENST00000607805	RIG	Q13278	110 aa		12.68	□□□□□ -0.38
NECAB3-222	ENST00000607805	C10orf25	Q5T742	122 aa		12.68	□□□□□ -0.38
NECAB3-222	ENST00000607805	RPL32	P62910	135 aa	Known RBP	12.67	□□□□□ -0.38
NECAB3-222	ENST00000607805	MRPL51	Q4U2R6	128 aa	Known RBP	12.67	□□□□□ -0.38
NECAB3-222	ENST00000607805	KRTAP7-1	Q8IUC3	87 aa		12.67	□□□□□ -0.38
NECAB3-222	ENST00000607805	IMMP2L	Q96T52	175 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms