RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 Q8N9W7 124 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 CCL17Q92583 94 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 HTTP42858 3142 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 A0A087WVE0 104 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 H3BUA1 57 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 TMEM256-PLSCR3K7ERE1 68 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 CDKN2A-AS1Q9UH64 79 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 PKIGQ9Y2B9 76 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 S4R3C0 116 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 CHD7Q9P2D1 2997 aa2.88□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV1OR15-1A0A075B7D0 117 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 LOC110117498A0A087WWA1 95 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 A0A087WWL8 130 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRAV12-3A0A0B4J271 114 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 LY6G6DO95868 133 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 PDE6GP18545 87 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 BLCAPP62952 87 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 CXCL6P80162 114 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 SS18Q15532 418 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 LINC00242Q5T6M2 205 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 CLEC19AQ6UXS0 136 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 SMIM11BQ8TCY0 68 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 UBL5Q9BZL1 73 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 Q9H8V8 135 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 C14orf132Q9NPU4 83 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 ORMDL1Q9P0S3 153 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 FAM215AQ9Y5M1 114 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 CHD9Q3L8U1 2897 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 UTRNP46939 3433 aa2.87□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRAV23DV6A0A075B6W5 121 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 A0A1W2PNU3 283 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 PLAC8L1A1L4L8 177 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 A8MTW9 85 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 SMIM1B2RUZ4 78 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 CRPP02741 224 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV4-38-2P0DP08 117 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 EDN2P20800 178 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 COX7A1P24310 79 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 CD164Q04900 197 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 FAM27E3Q08E93 113 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 C9orf129Q5T035 196 aaKnown RBP2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGFL3Q6UXB1 125 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 FAM19A1Q7Z5A9 133 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 MIR7-3HGQ8N6C7 128 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 USMG5Q96IX5 58 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 Q9HAA7 133 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 ESM1Q9NQ30 184 aa2.86□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3OR16-12A0A075B7B8 117 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 A0A087WYN8 130 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3-35A0A0C4DH35 117 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGKV2-29A2NJV5 120 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 A8MZ25 164 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 E7EQL1 145 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 CCL21O00585 134 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3-53P01767 116 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 MIFP14174 115 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 HILS1P60008 231 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 RBM3P98179 157 aaKnown RBP2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 COX6A2Q02221 97 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 Q1T7F1 81 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 LINC00337Q8N6G1 96 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 TMEM105Q8N8V8 129 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 SND1-IT1Q9HBX3 110 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 WDR87Q6ZQQ6 2873 aa2.85□□□□□ -1.95
HMGB1P50-201ENST00000605814 POLEQ07864 2286 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGHV3OR16-8A0A075B7F1 116 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRBV7-4A0A0J9YYF1 115 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 F6UB75 175 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 F8WEM9 126 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 K7EQD1 137 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 ATP6V0E1O15342 81 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 RPL36AP83881 106 aaKnown RBP2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 BSPH1Q075Z2 132 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 ENHOQ6UWT2 76 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 C6orf223Q8N319 242 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 WFDC11Q8NEX6 87 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 FDCSPQ8NFU4 85 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 DYNLRB2Q8TF09 96 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 SIRPDQ9H106 197 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 LINC00474Q9P2X8 69 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 DNAH14Q0VDD8 3507 aa2.84□□□□□ -1.95
HMGB1P50-201ENST00000605814 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 C5orf42Q9H799 3197 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 UNC80Q8N2C7 3258 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV3OR16-13A0A075B7E8 117 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV3-74A0A0B4J1X5 117 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms