RNA–Protein interactions for RNA: ENST00000603055.1

NLRC3-203, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5

Gene NLRC3, Length 1,158 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-203ENST00000603055 A0A1B0GW15 77 aa11.67□□□□□ -0.54
NLRC3-203ENST00000603055 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
NLRC3-203ENST00000603055 PHOX2AO14813 284 aa11.66□□□□□ -0.54
NLRC3-203ENST00000603055 S100A8P05109 93 aa11.66□□□□□ -0.54
NLRC3-203ENST00000603055 S100A6P06703 90 aa11.66□□□□□ -0.54
NLRC3-203ENST00000603055 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
NLRC3-203ENST00000603055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.66□□□□□ -0.54
NLRC3-203ENST00000603055 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
NLRC3-203ENST00000603055 PANO1I0J062 215 aa11.65□□□□□ -0.54
NLRC3-203ENST00000603055 AMTP48728 403 aa11.65□□□□□ -0.54
NLRC3-203ENST00000603055 COTL1Q14019 142 aa11.65□□□□□ -0.54
NLRC3-203ENST00000603055 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
NLRC3-203ENST00000603055 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.55
NLRC3-203ENST00000603055 SDIM1Q6ZPB5 146 aa11.64□□□□□ -0.55
NLRC3-203ENST00000603055 LOC105371267A0A1B0GV96 52 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 UBE2L6O14933 153 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BKO60814 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BJP06899 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BOP23527 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BBP33778 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BDP58876 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 CNBPP62633 177 aaKnown RBP11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BCP62807 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST2H2BEQ16778 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BHQ93079 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BNQ99877 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 HIST1H2BMQ99879 126 aa11.63□□□□□ -0.55
NLRC3-203ENST00000603055 hDV102S1A0JD36 115 aa11.62□□□□□ -0.55
NLRC3-203ENST00000603055 HBBP68871 147 aa11.62□□□□□ -0.55
NLRC3-203ENST00000603055 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
NLRC3-203ENST00000603055 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
NLRC3-203ENST00000603055 TMEM136Q6ZRR5 245 aa11.62□□□□□ -0.55
NLRC3-203ENST00000603055 RPL39LQ96EH5 51 aaKnown RBP11.62□□□□□ -0.55
NLRC3-203ENST00000603055 RPL37AP61513 92 aaKnown RBP11.61□□□□□ -0.55
NLRC3-203ENST00000603055 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
NLRC3-203ENST00000603055 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
NLRC3-203ENST00000603055 SLPIP03973 132 aa11.6□□□□□ -0.55
NLRC3-203ENST00000603055 C5orf52A6NGY3 159 aa11.59□□□□□ -0.55
NLRC3-203ENST00000603055 CAMPP49913 170 aa11.59□□□□□ -0.55
NLRC3-203ENST00000603055 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
NLRC3-203ENST00000603055 CIRBPQ14011 172 aaKnown RBP11.59□□□□□ -0.55
NLRC3-203ENST00000603055 COA6Q5JTJ3 125 aaKnown RBP11.59□□□□□ -0.55
NLRC3-203ENST00000603055 HMCN2Q8NDA2 5059 aa11.59□□□□□ -0.55
NLRC3-203ENST00000603055 OXTP01178 125 aa11.58□□□□□ -0.56
NLRC3-203ENST00000603055 AP5S1Q9NUS5 200 aa11.58□□□□□ -0.56
NLRC3-203ENST00000603055 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 NCR2O95944 276 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 APCSP02743 223 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
NLRC3-203ENST00000603055 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
NLRC3-203ENST00000603055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
NLRC3-203ENST00000603055 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
NLRC3-203ENST00000603055 IGKV2-29A2NJV5 120 aaPredicted RBP11.56□□□□□ -0.56
NLRC3-203ENST00000603055 NDUFA6P56556 154 aa11.56□□□□□ -0.56
NLRC3-203ENST00000603055 MRAP2Q96G30 205 aa11.56□□□□□ -0.56
NLRC3-203ENST00000603055 SNRPEP62304 92 aaKnown RBP11.55□□□□□ -0.56
NLRC3-203ENST00000603055 AMMECR1LQ6DCA0 310 aa11.55□□□□□ -0.56
NLRC3-203ENST00000603055 H7C423 109 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 PPP1R17O96001 155 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 FGF6P10767 208 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 RAB4AP20338 218 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
NLRC3-203ENST00000603055 AMN1Q8IY45 258 aa11.54□□□□□ -0.56
NLRC3-203ENST00000603055 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
NLRC3-203ENST00000603055 TRBV6-5A0A0K0K1A5 114 aa11.53□□□□□ -0.56
NLRC3-203ENST00000603055 FAM104BQ5XKR9 115 aa11.53□□□□□ -0.56
NLRC3-203ENST00000603055 I3L3M4 83 aa11.52□□□□□ -0.57
NLRC3-203ENST00000603055 CFAP161Q6P656 301 aa11.52□□□□□ -0.57
NLRC3-203ENST00000603055 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
NLRC3-203ENST00000603055 A0A087WYN8 130 aa11.51□□□□□ -0.57
NLRC3-203ENST00000603055 PMCHP20382 165 aa11.51□□□□□ -0.57
NLRC3-203ENST00000603055 HIGD2BQ4VC39 106 aa11.51□□□□□ -0.57
NLRC3-203ENST00000603055 RNF185Q96GF1 192 aa11.51□□□□□ -0.57
NLRC3-203ENST00000603055 TSHBP01222 138 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 PPBPP02775 128 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 ESDP10768 282 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 ZNF25P17030 456 aaPredicted RBP11.5□□□□□ -0.57
NLRC3-203ENST00000603055 CKS2P33552 79 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 SERTAD4-AS1Q5TG53 156 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
NLRC3-203ENST00000603055 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
NLRC3-203ENST00000603055 FOXI1Q12951 378 aa11.49□□□□□ -0.57
NLRC3-203ENST00000603055 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
NLRC3-203ENST00000603055 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
NLRC3-203ENST00000603055 ST20Q9HBF5 79 aa11.49□□□□□ -0.57
NLRC3-203ENST00000603055 COX6A2Q02221 97 aa11.48□□□□□ -0.57
NLRC3-203ENST00000603055 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
NLRC3-203ENST00000603055 ALKBH7Q9BT30 221 aaPredicted RBP11.48□□□□□ -0.57
NLRC3-203ENST00000603055 PLAC8Q9NZF1 115 aa11.48□□□□□ -0.57
NLRC3-203ENST00000603055 S100A2P29034 98 aa11.47□□□□□ -0.57
NLRC3-203ENST00000603055 POLR2KP53803 58 aaKnown RBP11.47□□□□□ -0.57
NLRC3-203ENST00000603055 ORMDL3Q8N138 153 aa11.47□□□□□ -0.57
NLRC3-203ENST00000603055 PRSS3P2Q8NHM4 247 aa11.47□□□□□ -0.57
NLRC3-203ENST00000603055 XCL1P47992 114 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms