RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 BTF3L4Q96K17 158 aa13.51□□□□□ -0.25
PPFIA3-209ENST00000602783 NAT8Q9UHE5 227 aa13.51□□□□□ -0.25
PPFIA3-209ENST00000602783 NAT8BQ9UHF3 227 aa13.51□□□□□ -0.25
PPFIA3-209ENST00000602783 CFAP161Q6P656 301 aa13.5□□□□□ -0.25
PPFIA3-209ENST00000602783 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
PPFIA3-209ENST00000602783 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
PPFIA3-209ENST00000602783 TRBV27A0A0K0K1C4 114 aa13.49□□□□□ -0.25
PPFIA3-209ENST00000602783 CHTF8P0CG12 524 aa13.49□□□□□ -0.25
PPFIA3-209ENST00000602783 HIGD2BQ4VC39 106 aa13.49□□□□□ -0.25
PPFIA3-209ENST00000602783 A0A087WYN8 130 aa13.48□□□□□ -0.25
PPFIA3-209ENST00000602783 PEA15Q15121 130 aa13.48□□□□□ -0.25
PPFIA3-209ENST00000602783 PLA2G2DQ9UNK4 145 aa13.48□□□□□ -0.25
PPFIA3-209ENST00000602783 C7orf77A4D0Y5 90 aa13.47□□□□□ -0.25
PPFIA3-209ENST00000602783 FOXI1Q12951 378 aa13.47□□□□□ -0.25
PPFIA3-209ENST00000602783 NRACQ8N912 160 aa13.47□□□□□ -0.25
PPFIA3-209ENST00000602783 SMIM27A0A1W2PRY6 76 aa13.46□□□□□ -0.25
PPFIA3-209ENST00000602783 XCL1P47992 114 aa13.46□□□□□ -0.25
PPFIA3-209ENST00000602783 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.25
PPFIA3-209ENST00000602783 GVQW2A0A096LPI5 108 aaPredicted RBP13.45□□□□□ -0.26
PPFIA3-209ENST00000602783 LINC00959A0A1B0GUT2 108 aa13.45□□□□□ -0.26
PPFIA3-209ENST00000602783 CCL25O15444 150 aa13.45□□□□□ -0.26
PPFIA3-209ENST00000602783 SPACA4Q8TDM5 124 aa13.45□□□□□ -0.26
PPFIA3-209ENST00000602783 SMDT1Q9H4I9 107 aa13.45□□□□□ -0.26
PPFIA3-209ENST00000602783 VCYO14598 125 aa13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 PPP1R17O96001 155 aa13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 FCER1GP30273 86 aa13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 SUMO2P61956 95 aaKnown RBP13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 MRPL51Q4U2R6 128 aaKnown RBP13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 FAM104BQ5XKR9 115 aa13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 Q6ZRU5 148 aa13.44□□□□□ -0.26
PPFIA3-209ENST00000602783 CAMPP49913 170 aa13.43□□□□□ -0.26
PPFIA3-209ENST00000602783 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
PPFIA3-209ENST00000602783 COX6A2Q02221 97 aa13.42□□□□□ -0.26
PPFIA3-209ENST00000602783 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
PPFIA3-209ENST00000602783 PPP1R2P9O14990 202 aa13.41□□□□□ -0.26
PPFIA3-209ENST00000602783 SS18Q15532 418 aa13.41□□□□□ -0.26
PPFIA3-209ENST00000602783 PLAC8Q9NZF1 115 aa13.41□□□□□ -0.26
PPFIA3-209ENST00000602783 UBR4Q5T4S7 5183 aa13.41□□□□□ -0.26
PPFIA3-209ENST00000602783 A0A1B0GW15 77 aa13.4□□□□□ -0.26
PPFIA3-209ENST00000602783 MT1HL1P0DM35 61 aa13.4□□□□□ -0.26
PPFIA3-209ENST00000602783 PRSS3P2Q8NHM4 247 aa13.4□□□□□ -0.26
PPFIA3-209ENST00000602783 KIR2DL4Q99706 377 aa13.4□□□□□ -0.26
PPFIA3-209ENST00000602783 MRPL54Q6P161 138 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-209ENST00000602783 UBE2D4Q9Y2X8 147 aa13.39□□□□□ -0.27
PPFIA3-209ENST00000602783 IGHV1-58A0A0C4DH39 117 aa13.38□□□□□ -0.27
PPFIA3-209ENST00000602783 PHOX2AO14813 284 aa13.38□□□□□ -0.27
PPFIA3-209ENST00000602783 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
PPFIA3-209ENST00000602783 IGKV2-24A0A0C4DH68 120 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 LINC00862A6NCI5 91 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 CKS2P33552 79 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 HBBP68871 147 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 CD164L2Q6UWJ8 174 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 C7orf33Q8WU49 177 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 LINC00526Q96FQ7 95 aa13.37□□□□□ -0.27
PPFIA3-209ENST00000602783 C20orf78Q9BR46 151 aa13.36□□□□□ -0.27
PPFIA3-209ENST00000602783 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-209ENST00000602783 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
PPFIA3-209ENST00000602783 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
PPFIA3-209ENST00000602783 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
PPFIA3-209ENST00000602783 S100A8P05109 93 aa13.35□□□□□ -0.27
PPFIA3-209ENST00000602783 Q6ZUT4 128 aa13.35□□□□□ -0.27
PPFIA3-209ENST00000602783 D6R8Y8 96 aa13.34□□□□□ -0.27
PPFIA3-209ENST00000602783 F8W036 122 aa13.34□□□□□ -0.27
PPFIA3-209ENST00000602783 RPL32P62910 135 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-209ENST00000602783 CARD19Q96LW7 228 aa13.34□□□□□ -0.27
PPFIA3-209ENST00000602783 A0A096LNI7 61 aa13.33□□□□□ -0.28
PPFIA3-209ENST00000602783 STPG4Q8N801 248 aa13.33□□□□□ -0.28
PPFIA3-209ENST00000602783 TMEM18Q96B42 140 aa13.33□□□□□ -0.28
PPFIA3-209ENST00000602783 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
PPFIA3-209ENST00000602783 C1orf196B1AJZ1 125 aa13.32□□□□□ -0.28
PPFIA3-209ENST00000602783 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
PPFIA3-209ENST00000602783 NPYP01303 97 aa13.32□□□□□ -0.28
PPFIA3-209ENST00000602783 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
PPFIA3-209ENST00000602783 TRAV13-1A0A0B4J241 112 aa13.31□□□□□ -0.28
PPFIA3-209ENST00000602783 TCAPO15273 167 aa13.31□□□□□ -0.28
PPFIA3-209ENST00000602783 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
PPFIA3-209ENST00000602783 COX7A2LO14548 114 aa13.3□□□□□ -0.28
PPFIA3-209ENST00000602783 MALP21145 153 aa13.3□□□□□ -0.28
PPFIA3-209ENST00000602783 SYCNQ0VAF6 134 aa13.29□□□□□ -0.28
PPFIA3-209ENST00000602783 ATP5L2Q7Z4Y8 100 aa13.29□□□□□ -0.28
PPFIA3-209ENST00000602783 PKIGQ9Y2B9 76 aa13.29□□□□□ -0.28
PPFIA3-209ENST00000602783 PPBPP02775 128 aa13.28□□□□□ -0.28
PPFIA3-209ENST00000602783 IGLV4-69A0A075B6H9 119 aa13.27□□□□□ -0.29
PPFIA3-209ENST00000602783 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
PPFIA3-209ENST00000602783 C5orf38Q86SI9 138 aa13.26□□□□□ -0.29
PPFIA3-209ENST00000602783 ORMDL3Q8N138 153 aa13.26□□□□□ -0.29
PPFIA3-209ENST00000602783 LINC00474Q9P2X8 69 aa13.26□□□□□ -0.29
PPFIA3-209ENST00000602783 RAB14P61106 215 aa13.25□□□□□ -0.29
PPFIA3-209ENST00000602783 PNRC1Q12796 327 aaPredicted RBP13.25□□□□□ -0.29
PPFIA3-209ENST00000602783 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
PPFIA3-209ENST00000602783 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
PPFIA3-209ENST00000602783 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
PPFIA3-209ENST00000602783 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
PPFIA3-209ENST00000602783 OPRPNQ99935 248 aaPredicted RBP13.24□□□□□ -0.29
PPFIA3-209ENST00000602783 TNXBP22105 4242 aa13.24□□□□□ -0.29
PPFIA3-209ENST00000602783 CAMK2N2Q96S95 79 aa13.23□□□□□ -0.29
PPFIA3-209ENST00000602783 APOMO95445 188 aa13.22□□□□□ -0.29
PPFIA3-209ENST00000602783 MRPS36P82909 103 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms