RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 IGKV3OR2-268A0A0C4DH90 116 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 MT-ATP8P03928 68 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 SSBP1Q04837 148 aaKnown RBP1.23□□□□□ -2.21
SGMS1-207ENST00000602619 SPRNQ5BIV9 151 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 C10orf128Q5T292 105 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 C9orf62Q8N4C0 152 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 C15orf53Q8NAA6 179 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 ZNF625Q96I27 306 aaPredicted RBP1.23□□□□□ -2.21
SGMS1-207ENST00000602619 LINC00312Q9Y6C7 94 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 KIF13AQ9H1H9 1805 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 A0A1B0GUL6 1792 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 RGPD5Q99666 1765 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 ZFC3H1O60293 1989 aaKnown RBP1.22□□□□□ -2.21
SGMS1-207ENST00000602619 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
SGMS1-207ENST00000602619 NDUFC1O43677 76 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
SGMS1-207ENST00000602619 GYPAP02724 150 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 ASIPP42127 132 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 UBE2D1P51668 147 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 FXYD4P59646 89 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 DEFB103AP81534 67 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 Q0VG73 95 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 FAM74A4Q5TZK3 123 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 UNQ6190/PRO20217Q6UXQ8 127 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 DEFB132Q7Z7B7 95 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 DEFB106AQ8N104 65 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 ZNF563Q8TA94 476 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 MGST2Q99735 147 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 PMCHL2Q9BQD1 86 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 BET1LQ9NYM9 111 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 QSER1Q2KHR3 1735 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 MYH8P13535 1937 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 HELZP42694 1942 aaKnown RBP1.22□□□□□ -2.21
SGMS1-207ENST00000602619 COL4A5P29400 1685 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 ROBO1Q9Y6N7 1651 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 WNK3Q9BYP7 1800 aa1.22□□□□□ -2.21
SGMS1-207ENST00000602619 ABCA3Q99758 1704 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 LOC101927531A0A1B0GV80 90 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 LOC285095A0A1B0GVY8 99 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 CRYM-AS1A6NIL9 109 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 ATOX1O00244 68 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 IGLC1P0CG04 106 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
SGMS1-207ENST00000602619 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 SNRPGP62308 76 aaKnown RBP1.21□□□□□ -2.22
SGMS1-207ENST00000602619 SEC11AP67812 179 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 KRTAP13-4Q3LI77 160 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 C20orf197Q8N268 126 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 UQCR10Q9UDW1 63 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 BPTFQ12830 3046 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 COL11A1P12107 1806 aaPredicted RBP1.21□□□□□ -2.22
SGMS1-207ENST00000602619 CACNA1GO43497 2377 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 MYH6P13533 1939 aa1.21□□□□□ -2.22
SGMS1-207ENST00000602619 LRRC37AA6NMS7 1700 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 COL5A3P25940 1745 aaPredicted RBP1.2□□□□□ -2.22
SGMS1-207ENST00000602619 SRCAPQ6ZRS2 3230 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 TRBV7-3A0A075B6L6 115 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 hADV29S1A0JD25 119 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
SGMS1-207ENST00000602619 S100A3P33764 101 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 SMIM11AP58511 58 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 NUMA1Q14980 2115 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 SMIM5Q71RC9 77 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 COX7B2Q8TF08 81 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 LINC00474Q9P2X8 69 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 V9GYH0 126 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 STRCP1A6NGW2 1772 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 ICE1Q9Y2F5 2266 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 NCKAP5O14513 1909 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 MYH13Q9UKX3 1938 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 NRAPQ86VF7 1730 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 ALPK2Q86TB3 2170 aa1.2□□□□□ -2.22
SGMS1-207ENST00000602619 LTBP2Q14767 1821 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 RBBP6Q7Z6E9 1792 aaKnown RBP1.19□□□□□ -2.22
SGMS1-207ENST00000602619 MYH1P12882 1939 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 MPDZO75970 2070 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 SPAG17Q6Q759 2223 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
SGMS1-207ENST00000602619 CCL3L1P16619 93 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 CAV3P56539 151 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 RPL38P63173 70 aaKnown RBP1.19□□□□□ -2.22
SGMS1-207ENST00000602619 FXYD3Q14802 87 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 ZNF56Q15929 161 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 Q6ZQY7 126 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 RPS27LQ71UM5 84 aaKnown RBP1.19□□□□□ -2.22
SGMS1-207ENST00000602619 DOT1LQ8TEK3 1739 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 DOCK10Q96BY6 2186 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 FAM167A-AS1Q96KT0 104 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 OBSCN-AS1Q96MR7 158 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 MANBALQ9NQG1 85 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 Q9Y3F1 56 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 ATG2AQ2TAZ0 1938 aa1.19□□□□□ -2.22
SGMS1-207ENST00000602619 EP400Q96L91 3159 aa1.18□□□□□ -2.22
SGMS1-207ENST00000602619 LY75O60449 1722 aa1.18□□□□□ -2.22
SGMS1-207ENST00000602619 NRXN2Q9P2S2 1712 aa1.18□□□□□ -2.22
SGMS1-207ENST00000602619 PCNX2A6NKB5 2137 aa1.18□□□□□ -2.22
SGMS1-207ENST00000602619 KIAA1549Q9HCM3 1950 aa1.18□□□□□ -2.22
SGMS1-207ENST00000602619 KIAA1549LQ6ZVL6 1849 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms