RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 MALP21145 153 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 BLOC1S1P78537 153 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 FOXI1Q12951 378 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 MRAP2Q96G30 205 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 ST20Q9HBF5 79 aa5.99□□□□□ -1.45
VRK3-224ENST00000601849 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
VRK3-224ENST00000601849 FAM231BA6NCW3 169 aa5.98□□□□□ -1.45
VRK3-224ENST00000601849 A8MWL6 223 aa5.98□□□□□ -1.45
VRK3-224ENST00000601849 KRTAP10-8P60410 259 aa5.98□□□□□ -1.45
VRK3-224ENST00000601849 CD164L2Q6UWJ8 174 aa5.98□□□□□ -1.45
VRK3-224ENST00000601849 RPL39LQ96EH5 51 aaKnown RBP5.98□□□□□ -1.45
VRK3-224ENST00000601849 RNASE7Q9H1E1 156 aaKnown RBP5.98□□□□□ -1.45
VRK3-224ENST00000601849 TRBV20OR9-2A0A075B6H5 130 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 C1orf196B1AJZ1 125 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 GATCO43716 136 aaKnown RBP5.97□□□□□ -1.45
VRK3-224ENST00000601849 BCL2P10415 239 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 RAB14P61106 215 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 ODF1Q14990 250 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 OCC1Q8TAD7 63 aa5.97□□□□□ -1.45
VRK3-224ENST00000601849 IGLV4-69A0A075B6H9 119 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 TRBV6-5A0A0K0K1A5 114 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 PPP1R17O96001 155 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 CAMPP49913 170 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 GAGE2BQ13066 116 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
VRK3-224ENST00000601849 ZNF664Q8N3J9 261 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.46
VRK3-224ENST00000601849 COX7A2LO14548 114 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 APOMO95445 188 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 MT-ND6P03923 174 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 ESDP10768 282 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 FCER1GP30273 86 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 IFITM2Q01629 132 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 MRPL52Q86TS9 123 aaKnown RBP5.95□□□□□ -1.46
VRK3-224ENST00000601849 TSKUQ8WUA8 353 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 TMEM18Q96B42 140 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 LINC00526Q96FQ7 95 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
VRK3-224ENST00000601849 C7orf77A4D0Y5 90 aa5.94□□□□□ -1.46
VRK3-224ENST00000601849 VCYO14598 125 aa5.94□□□□□ -1.46
VRK3-224ENST00000601849 FOXA3P55318 350 aaPredicted RBP5.94□□□□□ -1.46
VRK3-224ENST00000601849 TRBV27A0A0K0K1C4 114 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 A0A1B0GUT8 65 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 K7EN84 100 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 TSHBP01222 138 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 CT83Q5H943 113 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 FAM231DQ6ZW35 169 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 KIR2DL4Q99706 377 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 TMEM191AQ9H0A3 160 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 TMEM242Q9NWH2 141 aa5.93□□□□□ -1.46
VRK3-224ENST00000601849 TMEM250H0YL14 139 aa5.92□□□□□ -1.46
VRK3-224ENST00000601849 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
VRK3-224ENST00000601849 NUP35Q8NFH5 326 aa5.92□□□□□ -1.46
VRK3-224ENST00000601849 C2orf48Q96LS8 159 aa5.92□□□□□ -1.46
VRK3-224ENST00000601849 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
VRK3-224ENST00000601849 CSDC2Q9Y534 153 aaKnown RBP5.92□□□□□ -1.46
VRK3-224ENST00000601849 PPP1R2P9O14990 202 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 CEBPGP53567 150 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 POLR2KP53803 58 aaKnown RBP5.91□□□□□ -1.46
VRK3-224ENST00000601849 RIGQ13278 110 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
VRK3-224ENST00000601849 C1orf137Q5JT78 98 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 CLLU1Q5K131 121 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
VRK3-224ENST00000601849 TRAV13-1A0A0B4J241 112 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 HIGD1CA8MV81 97 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 F8WDY8 70 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 TCAPO15273 167 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 GAS8-AS1O95177 125 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 SRP19P09132 144 aaKnown RBP5.9□□□□□ -1.46
VRK3-224ENST00000601849 RAB4AP20338 218 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
VRK3-224ENST00000601849 EIF5A2Q9GZV4 153 aaKnown RBP5.9□□□□□ -1.46
VRK3-224ENST00000601849 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
VRK3-224ENST00000601849 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
VRK3-224ENST00000601849 TMEM241Q24JQ0 296 aa5.89□□□□□ -1.47
VRK3-224ENST00000601849 C5orf38Q86SI9 138 aa5.89□□□□□ -1.47
VRK3-224ENST00000601849 OR10D4PQ8NGN7 298 aa5.89□□□□□ -1.47
VRK3-224ENST00000601849 A0A087WZ39 114 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 C9JQL5 133 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.88□□□□□ -1.47
VRK3-224ENST00000601849 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
VRK3-224ENST00000601849 SPAG11BQ08648 103 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 AMN1Q8IY45 258 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 OPRPNQ99935 248 aaPredicted RBP5.88□□□□□ -1.47
VRK3-224ENST00000601849 SMIM7Q9BQ49 75 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 UBE2D4Q9Y2X8 147 aa5.88□□□□□ -1.47
VRK3-224ENST00000601849 LPAP08519 4548 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 LINC00862A6NCI5 91 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 ZNF727A8MUV8 499 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 NDUFA1O15239 70 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 PEA15Q15121 130 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 NDUFA5Q16718 116 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 PHF5AQ7RTV0 110 aaKnown RBP5.87□□□□□ -1.47
VRK3-224ENST00000601849 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
VRK3-224ENST00000601849 TIMM21Q9BVV7 248 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms