RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
IRF3-230ENST00000601809 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
IRF3-230ENST00000601809 D6R8Y8 96 aa11.29□□□□□ -0.6
IRF3-230ENST00000601809 NPYP01303 97 aa11.29□□□□□ -0.6
IRF3-230ENST00000601809 CKS2P33552 79 aa11.29□□□□□ -0.6
IRF3-230ENST00000601809 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
IRF3-230ENST00000601809 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
IRF3-230ENST00000601809 MYCBP2O75592 4640 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 TMEM218A2RU14 115 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 F8W036 122 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 FOXI1Q12951 378 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
IRF3-230ENST00000601809 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
IRF3-230ENST00000601809 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 LINC00959A0A1B0GUT2 108 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 PHOX2AO14813 284 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 KIR2DL4Q99706 377 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 CHAC1Q9BUX1 264 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 SMIM2Q9BVW6 85 aa11.27□□□□□ -0.61
IRF3-230ENST00000601809 PPBPP02775 128 aa11.26□□□□□ -0.61
IRF3-230ENST00000601809 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
IRF3-230ENST00000601809 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
IRF3-230ENST00000601809 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
IRF3-230ENST00000601809 FCER1GP30273 86 aa11.25□□□□□ -0.61
IRF3-230ENST00000601809 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
IRF3-230ENST00000601809 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
IRF3-230ENST00000601809 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
IRF3-230ENST00000601809 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
IRF3-230ENST00000601809 CIRBP-AS1Q8TBR5 109 aa11.24□□□□□ -0.61
IRF3-230ENST00000601809 PANO1I0J062 215 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 CCL25O15444 150 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 SEC11CQ9BY50 192 aa11.23□□□□□ -0.61
IRF3-230ENST00000601809 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
IRF3-230ENST00000601809 KRTAP10-4P60372 401 aaPredicted RBP11.22□□□□□ -0.61
IRF3-230ENST00000601809 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
IRF3-230ENST00000601809 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
IRF3-230ENST00000601809 PKHD1L1Q86WI1 4243 aa11.22□□□□□ -0.61
IRF3-230ENST00000601809 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
IRF3-230ENST00000601809 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
IRF3-230ENST00000601809 TCAPO15273 167 aa11.21□□□□□ -0.61
IRF3-230ENST00000601809 XCL1P47992 114 aa11.21□□□□□ -0.61
IRF3-230ENST00000601809 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
IRF3-230ENST00000601809 Q6ZUT4 128 aa11.21□□□□□ -0.61
IRF3-230ENST00000601809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
IRF3-230ENST00000601809 COMMD7Q86VX2 200 aa11.2□□□□□ -0.62
IRF3-230ENST00000601809 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
IRF3-230ENST00000601809 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
IRF3-230ENST00000601809 RNASE13Q5GAN3 156 aaKnown RBP11.19□□□□□ -0.62
IRF3-230ENST00000601809 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
IRF3-230ENST00000601809 CD164L2Q6UWJ8 174 aa11.19□□□□□ -0.62
IRF3-230ENST00000601809 CTDSP1Q9GZU7 261 aa11.19□□□□□ -0.62
IRF3-230ENST00000601809 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
IRF3-230ENST00000601809 SS18Q15532 418 aa11.18□□□□□ -0.62
IRF3-230ENST00000601809 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
IRF3-230ENST00000601809 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
IRF3-230ENST00000601809 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
IRF3-230ENST00000601809 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
IRF3-230ENST00000601809 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
IRF3-230ENST00000601809 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
IRF3-230ENST00000601809 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
IRF3-230ENST00000601809 C1orf196B1AJZ1 125 aa11.16□□□□□ -0.62
IRF3-230ENST00000601809 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
IRF3-230ENST00000601809 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
IRF3-230ENST00000601809 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
IRF3-230ENST00000601809 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
IRF3-230ENST00000601809 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.15□□□□□ -0.62
IRF3-230ENST00000601809 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
IRF3-230ENST00000601809 HERC1Q15751 4861 aa11.15□□□□□ -0.62
IRF3-230ENST00000601809 Q8N8P6 123 aa11.14□□□□□ -0.63
IRF3-230ENST00000601809 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
IRF3-230ENST00000601809 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
IRF3-230ENST00000601809 CHTF8P0CG12 524 aa11.13□□□□□ -0.63
IRF3-230ENST00000601809 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
IRF3-230ENST00000601809 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
IRF3-230ENST00000601809 FAT3Q8TDW7 4589 aa11.13□□□□□ -0.63
IRF3-230ENST00000601809 LOC389332A0A1B0GUA5 103 aa11.12□□□□□ -0.63
IRF3-230ENST00000601809 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
IRF3-230ENST00000601809 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
IRF3-230ENST00000601809 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
IRF3-230ENST00000601809 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
IRF3-230ENST00000601809 RAB5AP20339 215 aa11.11□□□□□ -0.63
IRF3-230ENST00000601809 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
IRF3-230ENST00000601809 IGHV3OR16-9A0A0B4J2B5 98 aa11.1□□□□□ -0.63
IRF3-230ENST00000601809 COX7A2LO14548 114 aa11.1□□□□□ -0.63
IRF3-230ENST00000601809 COX6A2Q02221 97 aa11.09□□□□□ -0.63
IRF3-230ENST00000601809 RHEBQ15382 184 aa11.09□□□□□ -0.63
IRF3-230ENST00000601809 KIAA1644Q3SXP7 199 aa11.09□□□□□ -0.63
IRF3-230ENST00000601809 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
IRF3-230ENST00000601809 A0A087WYN8 130 aa11.08□□□□□ -0.64
IRF3-230ENST00000601809 K7EMI3 77 aa11.08□□□□□ -0.64
IRF3-230ENST00000601809 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
IRF3-230ENST00000601809 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
IRF3-230ENST00000601809 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
IRF3-230ENST00000601809 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms