RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 DERL1Q9BUN8 251 aa3.97□□□□□ -1.77
LINC00343-209ENST00000601607 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
LINC00343-209ENST00000601607 PHLDA3Q9Y5J5 127 aa3.97□□□□□ -1.77
LINC00343-209ENST00000601607 TRBV6-1A0A0K0K1D8 114 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 IGSF23A1L1A6 192 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 HMSDA8MTL9 139 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 ARMS2P0C7Q2 107 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 S100A11P31949 105 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 SULT1A1P50225 295 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 SULT1A2P50226 295 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 EIF5AP63241 154 aaKnown RBP3.96□□□□□ -1.78
LINC00343-209ENST00000601607 IQCJQ1A5X6 159 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
LINC00343-209ENST00000601607 FAM74A1Q5RGS3 127 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 Q6ZVH6 145 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.96□□□□□ -1.78
LINC00343-209ENST00000601607 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 MBD2Q9UBB5 411 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 PKIGQ9Y2B9 76 aa3.96□□□□□ -1.78
LINC00343-209ENST00000601607 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
LINC00343-209ENST00000601607 IGHV1-24A0A0C4DH33 117 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 A4D1N5 150 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 GRIFINA4D1Z8 144 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 ZNF56Q15929 161 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 TMEM97Q5BJF2 176 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 PRNTQ86SH4 94 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 MED28Q9H204 178 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
LINC00343-209ENST00000601607 B4DEV8 164 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 M0R036 132 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 RAB4BP61018 213 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 HBG1P69891 147 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 HBG2P69892 147 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 ZNF345Q14585 488 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 ZNF674Q2M3X9 581 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 KHDC3LQ587J8 217 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 AKAP14Q86UN6 197 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 STX12Q86Y82 276 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 TMEM252Q8N6L7 170 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 AQP10Q96PS8 301 aa3.94□□□□□ -1.78
LINC00343-209ENST00000601607 CARHSP1Q9Y2V2 147 aaKnown RBP3.94□□□□□ -1.78
LINC00343-209ENST00000601607 MPC2O95563 127 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 TCRAP04437 139 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 BCL2P10415 239 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 TPT1P13693 172 aaKnown RBP3.93□□□□□ -1.78
LINC00343-209ENST00000601607 MT1HP80294 61 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 FLI1Q01543 452 aaPredicted RBP3.93□□□□□ -1.78
LINC00343-209ENST00000601607 ATP6V1FQ16864 119 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 CD164L2Q6UWJ8 174 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 ZFP82Q8N141 532 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 PPP1R1CQ8WVI7 109 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 CHCHD10Q8WYQ3 142 aaPredicted RBP3.93□□□□□ -1.78
LINC00343-209ENST00000601607 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
LINC00343-209ENST00000601607 TNFSF18Q9UNG2 199 aa3.93□□□□□ -1.78
LINC00343-209ENST00000601607 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
LINC00343-209ENST00000601607 TMSB15BA0A087X1C1 80 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 LOC107984640A0A0U1RRK4 108 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 SERTM2A0A1B0GWG4 89 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 FAM25EA8MYX2 175 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 KRBOX1C9JBD0 128 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 SSNA1O43805 119 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 TAS2R45P59539 299 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 Q5BKY6 102 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 DNLZQ5SXM8 178 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
LINC00343-209ENST00000601607 C2orf66Q6UXQ4 117 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 OR5C1Q8NGR4 320 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 KCNIP2Q9NS61 270 aa3.92□□□□□ -1.78
LINC00343-209ENST00000601607 FABP5P3A8MUU1 101 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 K7EQM0 130 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 PET100P0DJ07 73 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 PVALBP20472 110 aaPredicted RBP3.91□□□□□ -1.78
LINC00343-209ENST00000601607 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 LINC00518Q8N0U6 118 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 C9orf62Q8N4C0 152 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 KCNRGQ8N5I3 272 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 C5orf17Q8NAS9 161 aa3.91□□□□□ -1.78
LINC00343-209ENST00000601607 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
LINC00343-209ENST00000601607 HMGB3O15347 200 aaKnown RBP3.9□□□□□ -1.79
LINC00343-209ENST00000601607 SIX6O95475 246 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 FGF6P10767 208 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 CRIP1P50238 77 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
LINC00343-209ENST00000601607 SAPCD1Q5SSQ6 148 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 LINC00173Q6ZV60 143 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 STOML3Q8TAV4 291 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
LINC00343-209ENST00000601607 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
LINC00343-209ENST00000601607 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 C17orf112F2Z3M2 114 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.89□□□□□ -1.79
LINC00343-209ENST00000601607 UBE2L6O14933 153 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 SH2D1AO60880 128 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 PFDN1O60925 122 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 XCL1P47992 114 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms