RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 OR5A1Q8NGJ0 315 aa11.14□□□□□ -0.63
HERC3-214ENST00000601319 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
HERC3-214ENST00000601319 MT-ND4LP03901 98 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 FCER1GP30273 86 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 CKS2P33552 79 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 SCXQ7RTU7 201 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
HERC3-214ENST00000601319 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
HERC3-214ENST00000601319 TCAPO15273 167 aa11.12□□□□□ -0.63
HERC3-214ENST00000601319 PPBPP02775 128 aa11.12□□□□□ -0.63
HERC3-214ENST00000601319 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
HERC3-214ENST00000601319 CSDC2Q9Y534 153 aaKnown RBP11.12□□□□□ -0.63
HERC3-214ENST00000601319 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 PHOX2AO14813 284 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 IFITM2Q01629 132 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 SMAGPQ0VAQ4 97 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
HERC3-214ENST00000601319 D6R8Y8 96 aa11.1□□□□□ -0.63
HERC3-214ENST00000601319 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
HERC3-214ENST00000601319 CFAP161Q6P656 301 aa11.1□□□□□ -0.63
HERC3-214ENST00000601319 SMIM2Q9BVW6 85 aa11.1□□□□□ -0.63
HERC3-214ENST00000601319 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
HERC3-214ENST00000601319 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
HERC3-214ENST00000601319 TIMM21Q9BVV7 248 aa11.09□□□□□ -0.63
HERC3-214ENST00000601319 UBE2D4Q9Y2X8 147 aa11.09□□□□□ -0.63
HERC3-214ENST00000601319 NPYP01303 97 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 INAFM2P0DMQ5 153 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 FOXI1Q12951 378 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 ZNF664Q8N3J9 261 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 CIRBP-AS1Q8TBR5 109 aa11.08□□□□□ -0.64
HERC3-214ENST00000601319 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
HERC3-214ENST00000601319 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
HERC3-214ENST00000601319 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
HERC3-214ENST00000601319 CCL25O15444 150 aa11.06□□□□□ -0.64
HERC3-214ENST00000601319 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
HERC3-214ENST00000601319 SS18Q15532 418 aa11.06□□□□□ -0.64
HERC3-214ENST00000601319 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
HERC3-214ENST00000601319 TMEM218A2RU14 115 aa11.05□□□□□ -0.64
HERC3-214ENST00000601319 SLPIP03973 132 aa11.05□□□□□ -0.64
HERC3-214ENST00000601319 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
HERC3-214ENST00000601319 XCL1P47992 114 aa11.05□□□□□ -0.64
HERC3-214ENST00000601319 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
HERC3-214ENST00000601319 LAMTOR2Q9Y2Q5 125 aa11.05□□□□□ -0.64
HERC3-214ENST00000601319 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
HERC3-214ENST00000601319 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
HERC3-214ENST00000601319 CD164L2Q6UWJ8 174 aa11.04□□□□□ -0.64
HERC3-214ENST00000601319 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
HERC3-214ENST00000601319 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
HERC3-214ENST00000601319 PRSS47A8MTI9 375 aa11.03□□□□□ -0.64
HERC3-214ENST00000601319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
HERC3-214ENST00000601319 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
HERC3-214ENST00000601319 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 C1orf196B1AJZ1 125 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 Q6ZUT4 128 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 SEC11CQ9BY50 192 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
HERC3-214ENST00000601319 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
HERC3-214ENST00000601319 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
HERC3-214ENST00000601319 RPL39P62891 51 aaKnown RBP11□□□□□ -0.65
HERC3-214ENST00000601319 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
HERC3-214ENST00000601319 FLG2Q5D862 2391 aaPredicted RBP11□□□□□ -0.65
HERC3-214ENST00000601319 TRAV9-1A0A075B6T8 112 aa10.99□□□□□ -0.65
HERC3-214ENST00000601319 PANO1I0J062 215 aa10.99□□□□□ -0.65
HERC3-214ENST00000601319 RNASE13Q5GAN3 156 aaKnown RBP10.99□□□□□ -0.65
HERC3-214ENST00000601319 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
HERC3-214ENST00000601319 RAB5AP20339 215 aa10.98□□□□□ -0.65
HERC3-214ENST00000601319 KRTAP10-4P60372 401 aaPredicted RBP10.98□□□□□ -0.65
HERC3-214ENST00000601319 COMMD7Q86VX2 200 aa10.98□□□□□ -0.65
HERC3-214ENST00000601319 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
HERC3-214ENST00000601319 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
HERC3-214ENST00000601319 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
HERC3-214ENST00000601319 COX7A2LO14548 114 aa10.97□□□□□ -0.65
HERC3-214ENST00000601319 K7EMI3 77 aa10.96□□□□□ -0.65
HERC3-214ENST00000601319 PKIGQ9Y2B9 76 aa10.96□□□□□ -0.65
HERC3-214ENST00000601319 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.65
HERC3-214ENST00000601319 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
HERC3-214ENST00000601319 C10orf91Q5T1B1 145 aa10.95□□□□□ -0.66
HERC3-214ENST00000601319 Q8N8P6 123 aa10.95□□□□□ -0.66
HERC3-214ENST00000601319 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
HERC3-214ENST00000601319 MALP21145 153 aa10.94□□□□□ -0.66
HERC3-214ENST00000601319 COX6A2Q02221 97 aa10.94□□□□□ -0.66
HERC3-214ENST00000601319 CARD19Q96LW7 228 aa10.94□□□□□ -0.66
HERC3-214ENST00000601319 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
HERC3-214ENST00000601319 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
HERC3-214ENST00000601319 ZNF561-AS1K7EIQ3 104 aa10.93□□□□□ -0.66
HERC3-214ENST00000601319 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
HERC3-214ENST00000601319 A0A087WYN8 130 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 APOMO95445 188 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 S100PP25815 95 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 ORMDL2Q53FV1 153 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms