RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
RPS28-203ENST00000600659 BTF3L4Q96K17 158 aa10.23□□□□□ -0.77
RPS28-203ENST00000600659 IMMP2LQ96T52 175 aa10.23□□□□□ -0.77
RPS28-203ENST00000600659 CARHSP1Q9Y2V2 147 aaKnown RBP10.23□□□□□ -0.77
RPS28-203ENST00000600659 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
RPS28-203ENST00000600659 IGKV3OR2-268A0A0C4DH90 116 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 ORMDL3Q8N138 153 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 CTDSP1Q9GZU7 261 aa10.22□□□□□ -0.77
RPS28-203ENST00000600659 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.77
RPS28-203ENST00000600659 FCER1GP30273 86 aa10.21□□□□□ -0.78
RPS28-203ENST00000600659 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.78
RPS28-203ENST00000600659 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
RPS28-203ENST00000600659 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.78
RPS28-203ENST00000600659 PRELID3AQ96N28 172 aa10.21□□□□□ -0.78
RPS28-203ENST00000600659 LINC00959A0A1B0GUT2 108 aa10.2□□□□□ -0.78
RPS28-203ENST00000600659 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
RPS28-203ENST00000600659 PRSS47A8MTI9 375 aa10.2□□□□□ -0.78
RPS28-203ENST00000600659 FOXI1Q12951 378 aa10.2□□□□□ -0.78
RPS28-203ENST00000600659 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
RPS28-203ENST00000600659 TCAPO15273 167 aa10.19□□□□□ -0.78
RPS28-203ENST00000600659 SLPIP03973 132 aa10.19□□□□□ -0.78
RPS28-203ENST00000600659 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
RPS28-203ENST00000600659 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
RPS28-203ENST00000600659 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
RPS28-203ENST00000600659 Q6ZUT4 128 aa10.18□□□□□ -0.78
RPS28-203ENST00000600659 TIMM21Q9BVV7 248 aa10.18□□□□□ -0.78
RPS28-203ENST00000600659 LAMTOR2Q9Y2Q5 125 aa10.18□□□□□ -0.78
RPS28-203ENST00000600659 TRAV9-1A0A075B6T8 112 aa10.17□□□□□ -0.78
RPS28-203ENST00000600659 CNBPP62633 177 aaKnown RBP10.17□□□□□ -0.78
RPS28-203ENST00000600659 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
RPS28-203ENST00000600659 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
RPS28-203ENST00000600659 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
RPS28-203ENST00000600659 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
RPS28-203ENST00000600659 CCL25O15444 150 aa10.16□□□□□ -0.78
RPS28-203ENST00000600659 SMR3BP02814 79 aaPredicted RBP10.15□□□□□ -0.78
RPS28-203ENST00000600659 XCL1P47992 114 aa10.15□□□□□ -0.78
RPS28-203ENST00000600659 RHEBQ15382 184 aa10.15□□□□□ -0.78
RPS28-203ENST00000600659 hDV102S1A0JD36 115 aa10.14□□□□□ -0.79
RPS28-203ENST00000600659 S100PP25815 95 aa10.14□□□□□ -0.79
RPS28-203ENST00000600659 NDUFA5Q16718 116 aa10.14□□□□□ -0.79
RPS28-203ENST00000600659 SCXQ7RTU7 201 aa10.14□□□□□ -0.79
RPS28-203ENST00000600659 GVQW2A0A096LPI5 108 aaPredicted RBP10.13□□□□□ -0.79
RPS28-203ENST00000600659 PANO1I0J062 215 aa10.13□□□□□ -0.79
RPS28-203ENST00000600659 TMEM18Q96B42 140 aa10.13□□□□□ -0.79
RPS28-203ENST00000600659 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
RPS28-203ENST00000600659 MAP1LC3AQ9H492 121 aa10.13□□□□□ -0.79
RPS28-203ENST00000600659 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
RPS28-203ENST00000600659 LOC389332A0A1B0GUA5 103 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 Q5VSD8 79 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 Q8N8P6 123 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 SPANXA1Q9NS26 97 aa10.12□□□□□ -0.79
RPS28-203ENST00000600659 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 APOC3P02656 99 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
RPS28-203ENST00000600659 SS18Q15532 418 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 SVBPQ8N300 66 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
RPS28-203ENST00000600659 SMAGPQ0VAQ4 97 aa10.1□□□□□ -0.79
RPS28-203ENST00000600659 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
RPS28-203ENST00000600659 GNB1LQ9BYB4 327 aa10.1□□□□□ -0.79
RPS28-203ENST00000600659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
RPS28-203ENST00000600659 TRAV13-1A0A0B4J241 112 aa10.09□□□□□ -0.79
RPS28-203ENST00000600659 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
RPS28-203ENST00000600659 SNAPINO95295 136 aa10.09□□□□□ -0.79
RPS28-203ENST00000600659 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
RPS28-203ENST00000600659 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
RPS28-203ENST00000600659 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
RPS28-203ENST00000600659 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
RPS28-203ENST00000600659 RAB5AP20339 215 aa10.08□□□□□ -0.8
RPS28-203ENST00000600659 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
RPS28-203ENST00000600659 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
RPS28-203ENST00000600659 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 LINC00526Q96FQ7 95 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 ALKBH7Q9BT30 221 aaPredicted RBP10.07□□□□□ -0.8
RPS28-203ENST00000600659 COX19Q49B96 90 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
RPS28-203ENST00000600659 AP5S1Q9NUS5 200 aa10.07□□□□□ -0.8
RPS28-203ENST00000600659 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
RPS28-203ENST00000600659 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
RPS28-203ENST00000600659 K7EMI3 77 aa10.06□□□□□ -0.8
RPS28-203ENST00000600659 KRTAP10-4P60372 401 aaPredicted RBP10.06□□□□□ -0.8
RPS28-203ENST00000600659 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
RPS28-203ENST00000600659 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
RPS28-203ENST00000600659 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
RPS28-203ENST00000600659 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
RPS28-203ENST00000600659 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 IGIPA6NJ69 53 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 MT-ND6P03923 174 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 SLC7A5P1Q8MH63 180 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms