RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 ESDP10768 282 aa9.16□□□□□ -0.94
EBI3-202ENST00000599339 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
EBI3-202ENST00000599339 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
EBI3-202ENST00000599339 A0A1B0GUT8 65 aa9.15□□□□□ -0.94
EBI3-202ENST00000599339 TSHBP01222 138 aa9.15□□□□□ -0.94
EBI3-202ENST00000599339 CEBPGP53567 150 aa9.15□□□□□ -0.94
EBI3-202ENST00000599339 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
EBI3-202ENST00000599339 MRPL52Q86TS9 123 aaKnown RBP9.15□□□□□ -0.94
EBI3-202ENST00000599339 TMEM191AQ9H0A3 160 aa9.15□□□□□ -0.94
EBI3-202ENST00000599339 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 SMAGPQ0VAQ4 97 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
EBI3-202ENST00000599339 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
EBI3-202ENST00000599339 HIGD1CA8MV81 97 aa9.13□□□□□ -0.95
EBI3-202ENST00000599339 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
EBI3-202ENST00000599339 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
EBI3-202ENST00000599339 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
EBI3-202ENST00000599339 PPP1R17O96001 155 aa9.12□□□□□ -0.95
EBI3-202ENST00000599339 MALP21145 153 aa9.12□□□□□ -0.95
EBI3-202ENST00000599339 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
EBI3-202ENST00000599339 Q6ZRP5 223 aa9.12□□□□□ -0.95
EBI3-202ENST00000599339 LINC00526Q96FQ7 95 aa9.12□□□□□ -0.95
EBI3-202ENST00000599339 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
EBI3-202ENST00000599339 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 C1orf196B1AJZ1 125 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 GAS8-AS1O95177 125 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 RAB4AP20338 218 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 FCER1GP30273 86 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 CAMPP49913 170 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 ALKAL2Q6UX46 152 aa9.11□□□□□ -0.95
EBI3-202ENST00000599339 EIF5A2Q9GZV4 153 aaKnown RBP9.11□□□□□ -0.95
EBI3-202ENST00000599339 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
EBI3-202ENST00000599339 COX7A2LO14548 114 aa9.1□□□□□ -0.95
EBI3-202ENST00000599339 VCYO14598 125 aa9.1□□□□□ -0.95
EBI3-202ENST00000599339 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
EBI3-202ENST00000599339 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
EBI3-202ENST00000599339 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
EBI3-202ENST00000599339 RIGQ13278 110 aa9.09□□□□□ -0.95
EBI3-202ENST00000599339 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
EBI3-202ENST00000599339 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
EBI3-202ENST00000599339 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
EBI3-202ENST00000599339 IGLV4-69A0A075B6H9 119 aa9.08□□□□□ -0.96
EBI3-202ENST00000599339 ZNF727A8MUV8 499 aa9.08□□□□□ -0.96
EBI3-202ENST00000599339 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
EBI3-202ENST00000599339 AKAP14Q86UN6 197 aa9.08□□□□□ -0.96
EBI3-202ENST00000599339 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
EBI3-202ENST00000599339 PPP1R2P9O14990 202 aa9.07□□□□□ -0.96
EBI3-202ENST00000599339 APOMO95445 188 aa9.07□□□□□ -0.96
EBI3-202ENST00000599339 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
EBI3-202ENST00000599339 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
EBI3-202ENST00000599339 LRP2P98164 4655 aa9.07□□□□□ -0.96
EBI3-202ENST00000599339 SMKR1H3BMG3 65 aa9.06□□□□□ -0.96
EBI3-202ENST00000599339 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
EBI3-202ENST00000599339 NUP35Q8NFH5 326 aa9.06□□□□□ -0.96
EBI3-202ENST00000599339 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
EBI3-202ENST00000599339 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
EBI3-202ENST00000599339 TNXBP22105 4242 aa9.05□□□□□ -0.96
EBI3-202ENST00000599339 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
EBI3-202ENST00000599339 KRTAP10-8P60410 259 aa9.05□□□□□ -0.96
EBI3-202ENST00000599339 NRACQ8N912 160 aa9.04□□□□□ -0.96
EBI3-202ENST00000599339 TIMM21Q9BVV7 248 aa9.04□□□□□ -0.96
EBI3-202ENST00000599339 NAT8BQ9UHF3 227 aa9.04□□□□□ -0.96
EBI3-202ENST00000599339 V9GYV3 84 aa9.04□□□□□ -0.96
EBI3-202ENST00000599339 TCAPO15273 167 aa9.03□□□□□ -0.96
EBI3-202ENST00000599339 MT-ND6P03923 174 aa9.03□□□□□ -0.96
EBI3-202ENST00000599339 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
EBI3-202ENST00000599339 RPL18AQ02543 176 aaKnown RBP9.03□□□□□ -0.96
EBI3-202ENST00000599339 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
EBI3-202ENST00000599339 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
EBI3-202ENST00000599339 LINC00862A6NCI5 91 aa9.02□□□□□ -0.97
EBI3-202ENST00000599339 SPAG11BQ08648 103 aa9.02□□□□□ -0.97
EBI3-202ENST00000599339 TMEM241Q24JQ0 296 aa9.02□□□□□ -0.97
EBI3-202ENST00000599339 Q6ZUT4 128 aa9.02□□□□□ -0.97
EBI3-202ENST00000599339 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.01□□□□□ -0.97
EBI3-202ENST00000599339 ODF1Q14990 250 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 FAM74A3Q4VXF1 159 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
EBI3-202ENST00000599339 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 OR10D4PQ8NGN7 298 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
EBI3-202ENST00000599339 A0A1B0GW15 77 aa9□□□□□ -0.97
EBI3-202ENST00000599339 F8WDY8 70 aa9□□□□□ -0.97
EBI3-202ENST00000599339 CKS2P33552 79 aa9□□□□□ -0.97
EBI3-202ENST00000599339 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
EBI3-202ENST00000599339 RNF151Q2KHN1 245 aa9□□□□□ -0.97
EBI3-202ENST00000599339 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
EBI3-202ENST00000599339 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
EBI3-202ENST00000599339 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
EBI3-202ENST00000599339 RPL23P62829 140 aaKnown RBP8.99□□□□□ -0.97
EBI3-202ENST00000599339 ADIRFQ15847 76 aa8.99□□□□□ -0.97
EBI3-202ENST00000599339 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
EBI3-202ENST00000599339 hCG_2014768A0A024R1R8 64 aa8.98□□□□□ -0.97
EBI3-202ENST00000599339 S100A8P05109 93 aa8.98□□□□□ -0.97
EBI3-202ENST00000599339 C1orf137Q5JT78 98 aa8.98□□□□□ -0.97
EBI3-202ENST00000599339 ORAOV1Q8WV07 137 aa8.98□□□□□ -0.97
EBI3-202ENST00000599339 OPRPNQ99935 248 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms