RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 CCL25O15444 150 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 GAS8-AS1O95177 125 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 TCTE3Q8IZS6 198 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 LYPD6BQ8NI32 183 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
PNKP-208ENST00000596624 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
PNKP-208ENST00000596624 PMCHP20382 165 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 XCL1P47992 114 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 PTTG1IPP53801 180 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 SYCNQ0VAF6 134 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 ODF1Q14990 250 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 TMEM191AQ9H0A3 160 aa6.53□□□□□ -1.36
PNKP-208ENST00000596624 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
PNKP-208ENST00000596624 ZNF664Q8N3J9 261 aa6.52□□□□□ -1.37
PNKP-208ENST00000596624 MRAP2Q96G30 205 aa6.52□□□□□ -1.37
PNKP-208ENST00000596624 ST20Q9HBF5 79 aa6.52□□□□□ -1.37
PNKP-208ENST00000596624 RAB4AP20338 218 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 CAMPP49913 170 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 SS18Q15532 418 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 NUP35Q8NFH5 326 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 LINC00526Q96FQ7 95 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 TMEM242Q9NWH2 141 aa6.51□□□□□ -1.37
PNKP-208ENST00000596624 LOC107984640A0A0U1RRK4 108 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 A0A1B0GUT8 65 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 C7orf77A4D0Y5 90 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 C1orf196B1AJZ1 125 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 C2orf48Q96LS8 159 aa6.5□□□□□ -1.37
PNKP-208ENST00000596624 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
PNKP-208ENST00000596624 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 NRACQ8N912 160 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 ISOC2Q96AB3 205 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 TIMM21Q9BVV7 248 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
PNKP-208ENST00000596624 COX7A2LO14548 114 aa6.48□□□□□ -1.37
PNKP-208ENST00000596624 VCYO14598 125 aa6.48□□□□□ -1.37
PNKP-208ENST00000596624 APOMO95445 188 aa6.48□□□□□ -1.37
PNKP-208ENST00000596624 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
PNKP-208ENST00000596624 F8WDY8 70 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 PPP1R17O96001 155 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
PNKP-208ENST00000596624 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 AMN1Q8IY45 258 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 LPAP08519 4548 aa6.47□□□□□ -1.37
PNKP-208ENST00000596624 TRBV24-1A0A075B6N3 115 aa6.46□□□□□ -1.38
PNKP-208ENST00000596624 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
PNKP-208ENST00000596624 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
PNKP-208ENST00000596624 GAGE2BQ13066 116 aa6.46□□□□□ -1.38
PNKP-208ENST00000596624 C9orf116Q5BN46 136 aaPredicted RBP6.46□□□□□ -1.38
PNKP-208ENST00000596624 BORCS7Q96B45 105 aa6.46□□□□□ -1.38
PNKP-208ENST00000596624 V9GYV3 84 aa6.46□□□□□ -1.38
PNKP-208ENST00000596624 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
PNKP-208ENST00000596624 MALP21145 153 aa6.45□□□□□ -1.38
PNKP-208ENST00000596624 CAMK2N2Q96S95 79 aa6.45□□□□□ -1.38
PNKP-208ENST00000596624 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
PNKP-208ENST00000596624 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 LINC00862A6NCI5 91 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 PPP1R2P9O14990 202 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 OR10D4PQ8NGN7 298 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 SMIM7Q9BQ49 75 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
PNKP-208ENST00000596624 FCER1GP30273 86 aa6.43□□□□□ -1.38
PNKP-208ENST00000596624 RIGQ13278 110 aa6.43□□□□□ -1.38
PNKP-208ENST00000596624 FAM104BQ5XKR9 115 aa6.43□□□□□ -1.38
PNKP-208ENST00000596624 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
PNKP-208ENST00000596624 Q6ZUT4 128 aa6.43□□□□□ -1.38
PNKP-208ENST00000596624 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 SMKR1H3BMG3 65 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 TCAPO15273 167 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 MT-ND6P03923 174 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 SRP19P09132 144 aaKnown RBP6.42□□□□□ -1.38
PNKP-208ENST00000596624 MRPS36P82909 103 aaKnown RBP6.42□□□□□ -1.38
PNKP-208ENST00000596624 MRPL51Q4U2R6 128 aaKnown RBP6.42□□□□□ -1.38
PNKP-208ENST00000596624 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
PNKP-208ENST00000596624 C5orf38Q86SI9 138 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 TMEM18Q96B42 140 aa6.42□□□□□ -1.38
PNKP-208ENST00000596624 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 ZNF727A8MUV8 499 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 TMEM241Q24JQ0 296 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 RNASE13Q5GAN3 156 aaKnown RBP6.41□□□□□ -1.38
PNKP-208ENST00000596624 C1orf137Q5JT78 98 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 IMMP2LQ96T52 175 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms