RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SLPIP03973 132 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
USE1-207ENST00000596136 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 ATP5L2Q7Z4Y8 100 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 C15orf56Q8N910 161 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
USE1-207ENST00000596136 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
USE1-207ENST00000596136 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
USE1-207ENST00000596136 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 F8W036 122 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 CKS2P33552 79 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 CFAP161Q6P656 301 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 KIR2DL4Q99706 377 aa8.4□□□□□ -1.06
USE1-207ENST00000596136 PHOX2AO14813 284 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 PPBPP02775 128 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 FCER1GP30273 86 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 IFITM2Q01629 132 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 FOXI1Q12951 378 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 ZNF664Q8N3J9 261 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
USE1-207ENST00000596136 TCAPO15273 167 aa8.38□□□□□ -1.07
USE1-207ENST00000596136 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
USE1-207ENST00000596136 SMAGPQ0VAQ4 97 aa8.38□□□□□ -1.07
USE1-207ENST00000596136 CIRBPQ14011 172 aaKnown RBP8.38□□□□□ -1.07
USE1-207ENST00000596136 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
USE1-207ENST00000596136 AP5S1Q9NUS5 200 aa8.38□□□□□ -1.07
USE1-207ENST00000596136 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
USE1-207ENST00000596136 HERC1Q15751 4861 aa8.37□□□□□ -1.07
USE1-207ENST00000596136 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
USE1-207ENST00000596136 D6R8Y8 96 aa8.37□□□□□ -1.07
USE1-207ENST00000596136 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
USE1-207ENST00000596136 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
USE1-207ENST00000596136 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
USE1-207ENST00000596136 GVQW2A0A096LPI5 108 aaPredicted RBP8.36□□□□□ -1.07
USE1-207ENST00000596136 PANO1I0J062 215 aa8.36□□□□□ -1.07
USE1-207ENST00000596136 CCL25O15444 150 aa8.36□□□□□ -1.07
USE1-207ENST00000596136 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
USE1-207ENST00000596136 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
USE1-207ENST00000596136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
USE1-207ENST00000596136 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
USE1-207ENST00000596136 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 NPYP01303 97 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 XCL1P47992 114 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 SS18Q15532 418 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 TMEM18Q96B42 140 aa8.35□□□□□ -1.07
USE1-207ENST00000596136 C1orf196B1AJZ1 125 aa8.34□□□□□ -1.07
USE1-207ENST00000596136 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
USE1-207ENST00000596136 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
USE1-207ENST00000596136 IGHV1-58A0A0C4DH39 117 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 ADCYAP1P18509 176 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 IMMP2LQ96T52 175 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
USE1-207ENST00000596136 RPL39P62891 51 aaKnown RBP8.32□□□□□ -1.08
USE1-207ENST00000596136 MRPS36P82909 103 aaKnown RBP8.31□□□□□ -1.08
USE1-207ENST00000596136 Q6ZUT4 128 aa8.31□□□□□ -1.08
USE1-207ENST00000596136 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
USE1-207ENST00000596136 SPANXA1Q9NS26 97 aa8.31□□□□□ -1.08
USE1-207ENST00000596136 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
USE1-207ENST00000596136 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
USE1-207ENST00000596136 SEC11CQ9BY50 192 aa8.3□□□□□ -1.08
USE1-207ENST00000596136 CTDSP1Q9GZU7 261 aa8.3□□□□□ -1.08
USE1-207ENST00000596136 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
USE1-207ENST00000596136 COX6A2Q02221 97 aa8.29□□□□□ -1.08
USE1-207ENST00000596136 PRSS3P2Q8NHM4 247 aa8.29□□□□□ -1.08
USE1-207ENST00000596136 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
USE1-207ENST00000596136 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
USE1-207ENST00000596136 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
USE1-207ENST00000596136 A0A087WYN8 130 aa8.28□□□□□ -1.08
USE1-207ENST00000596136 COX7A2LO14548 114 aa8.28□□□□□ -1.08
USE1-207ENST00000596136 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
USE1-207ENST00000596136 RAB5AP20339 215 aa8.28□□□□□ -1.08
USE1-207ENST00000596136 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
USE1-207ENST00000596136 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
USE1-207ENST00000596136 Q8N8P6 123 aa8.27□□□□□ -1.09
USE1-207ENST00000596136 LINC00526Q96FQ7 95 aa8.27□□□□□ -1.09
USE1-207ENST00000596136 OPRPNQ99935 248 aaPredicted RBP8.27□□□□□ -1.09
USE1-207ENST00000596136 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
USE1-207ENST00000596136 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
USE1-207ENST00000596136 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
USE1-207ENST00000596136 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
USE1-207ENST00000596136 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
USE1-207ENST00000596136 K7EMI3 77 aa8.26□□□□□ -1.09
USE1-207ENST00000596136 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
USE1-207ENST00000596136 SYCNQ0VAF6 134 aa8.26□□□□□ -1.09
USE1-207ENST00000596136 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
USE1-207ENST00000596136 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
USE1-207ENST00000596136 MALP21145 153 aa8.25□□□□□ -1.09
USE1-207ENST00000596136 IFI27P40305 119 aaPredicted RBP8.25□□□□□ -1.09
USE1-207ENST00000596136 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms