RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TMEM101Q96IK0 257 aa14.37□□□□□ -0.11
GTF2F1-204ENST00000594965 PPP1R2P9O14990 202 aa14.36□□□□□ -0.11
GTF2F1-204ENST00000594965 CKS2P33552 79 aa14.36□□□□□ -0.11
GTF2F1-204ENST00000594965 IFITM2Q01629 132 aa14.36□□□□□ -0.11
GTF2F1-204ENST00000594965 CDC42SE2Q9NRR3 84 aa14.36□□□□□ -0.11
GTF2F1-204ENST00000594965 FOXI1Q12951 378 aa14.35□□□□□ -0.11
GTF2F1-204ENST00000594965 SDIM1Q6ZPB5 146 aa14.35□□□□□ -0.11
GTF2F1-204ENST00000594965 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 TNFRSF6BO95407 300 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 S100A8P05109 93 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 FCER1GP30273 86 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 RPL32P62910 135 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 PNRC1Q12796 327 aaPredicted RBP14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 KIR2DL4Q99706 377 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 C20orf78Q9BR46 151 aa14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
GTF2F1-204ENST00000594965 D6R8Y8 96 aa14.33□□□□□ -0.12
GTF2F1-204ENST00000594965 F8W036 122 aa14.33□□□□□ -0.12
GTF2F1-204ENST00000594965 PANO1I0J062 215 aa14.33□□□□□ -0.12
GTF2F1-204ENST00000594965 ZNF664Q8N3J9 261 aa14.33□□□□□ -0.12
GTF2F1-204ENST00000594965 UBE2D4Q9Y2X8 147 aa14.33□□□□□ -0.12
GTF2F1-204ENST00000594965 SRRM2Q9UQ35 2752 aaKnown RBP14.32□□□□□ -0.12
GTF2F1-204ENST00000594965 NPYP01303 97 aa14.32□□□□□ -0.12
GTF2F1-204ENST00000594965 CFAP161Q6P656 301 aa14.32□□□□□ -0.12
GTF2F1-204ENST00000594965 ATP5L2Q7Z4Y8 100 aa14.32□□□□□ -0.12
GTF2F1-204ENST00000594965 AP5S1Q9NUS5 200 aa14.32□□□□□ -0.12
GTF2F1-204ENST00000594965 CCL25O15444 150 aa14.31□□□□□ -0.12
GTF2F1-204ENST00000594965 XCL1P47992 114 aa14.31□□□□□ -0.12
GTF2F1-204ENST00000594965 ANAPC16Q96DE5 110 aa14.31□□□□□ -0.12
GTF2F1-204ENST00000594965 CSDC2Q9Y534 153 aaKnown RBP14.31□□□□□ -0.12
GTF2F1-204ENST00000594965 PLA2G1BP04054 148 aaKnown RBP14.3□□□□□ -0.12
GTF2F1-204ENST00000594965 KRTAP10-4P60372 401 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-204ENST00000594965 HIGD2BQ4VC39 106 aa14.3□□□□□ -0.12
GTF2F1-204ENST00000594965 SMIM2Q9BVW6 85 aa14.3□□□□□ -0.12
GTF2F1-204ENST00000594965 GVQW2A0A096LPI5 108 aaPredicted RBP14.28□□□□□ -0.12
GTF2F1-204ENST00000594965 PHOX2AO14813 284 aa14.28□□□□□ -0.12
GTF2F1-204ENST00000594965 PPBPP02775 128 aa14.28□□□□□ -0.12
GTF2F1-204ENST00000594965 MT-ND4LP03901 98 aa14.28□□□□□ -0.12
GTF2F1-204ENST00000594965 SS18Q15532 418 aa14.28□□□□□ -0.12
GTF2F1-204ENST00000594965 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.27□□□□□ -0.13
GTF2F1-204ENST00000594965 ADCYAP1P18509 176 aa14.27□□□□□ -0.13
GTF2F1-204ENST00000594965 CIRBPQ14011 172 aaKnown RBP14.27□□□□□ -0.13
GTF2F1-204ENST00000594965 RNASE13Q5GAN3 156 aaKnown RBP14.27□□□□□ -0.13
GTF2F1-204ENST00000594965 FLG2Q5D862 2391 aaPredicted RBP14.27□□□□□ -0.13
GTF2F1-204ENST00000594965 IGHV3-64A0A075B6Q5 118 aa14.26□□□□□ -0.13
GTF2F1-204ENST00000594965 CD164L2Q6UWJ8 174 aa14.26□□□□□ -0.13
GTF2F1-204ENST00000594965 TIMM21Q9BVV7 248 aa14.26□□□□□ -0.13
GTF2F1-204ENST00000594965 RPL39P62891 51 aaKnown RBP14.25□□□□□ -0.13
GTF2F1-204ENST00000594965 TMEM136Q6ZRR5 245 aa14.25□□□□□ -0.13
GTF2F1-204ENST00000594965 Q6ZUT4 128 aa14.25□□□□□ -0.13
GTF2F1-204ENST00000594965 ORMDL3Q8N138 153 aa14.25□□□□□ -0.13
GTF2F1-204ENST00000594965 FAM104AQ969W3 186 aa14.25□□□□□ -0.13
GTF2F1-204ENST00000594965 SMAGPQ0VAQ4 97 aa14.24□□□□□ -0.13
GTF2F1-204ENST00000594965 UQCC3Q6UW78 93 aa14.24□□□□□ -0.13
GTF2F1-204ENST00000594965 TMEM18Q96B42 140 aa14.24□□□□□ -0.13
GTF2F1-204ENST00000594965 TCAPO15273 167 aa14.23□□□□□ -0.13
GTF2F1-204ENST00000594965 CHTF8P0CG12 524 aa14.23□□□□□ -0.13
GTF2F1-204ENST00000594965 PRELID3AQ96N28 172 aa14.23□□□□□ -0.13
GTF2F1-204ENST00000594965 MYCBP2O75592 4640 aa14.22□□□□□ -0.13
GTF2F1-204ENST00000594965 IGHV1-58A0A0C4DH39 117 aa14.22□□□□□ -0.13
GTF2F1-204ENST00000594965 TMEM218A2RU14 115 aa14.22□□□□□ -0.13
GTF2F1-204ENST00000594965 PRSS47A8MTI9 375 aa14.21□□□□□ -0.13
GTF2F1-204ENST00000594965 C1orf196B1AJZ1 125 aa14.21□□□□□ -0.13
GTF2F1-204ENST00000594965 LINC00526Q96FQ7 95 aa14.21□□□□□ -0.13
GTF2F1-204ENST00000594965 TRAV13-1A0A0B4J241 112 aa14.2□□□□□ -0.14
GTF2F1-204ENST00000594965 COX6A2Q02221 97 aa14.2□□□□□ -0.14
GTF2F1-204ENST00000594965 SPACA4Q8TDM5 124 aa14.2□□□□□ -0.14
GTF2F1-204ENST00000594965 PRSS3P2Q8NHM4 247 aa14.19□□□□□ -0.14
GTF2F1-204ENST00000594965 OPRPNQ99935 248 aaPredicted RBP14.19□□□□□ -0.14
GTF2F1-204ENST00000594965 IMMP2LQ96T52 175 aa14.18□□□□□ -0.14
GTF2F1-204ENST00000594965 SPANXA1Q9NS26 97 aa14.18□□□□□ -0.14
GTF2F1-204ENST00000594965 LAMTOR2Q9Y2Q5 125 aa14.17□□□□□ -0.14
GTF2F1-204ENST00000594965 A0A087WYN8 130 aa14.16□□□□□ -0.14
GTF2F1-204ENST00000594965 LOC389332A0A1B0GUA5 103 aa14.16□□□□□ -0.14
GTF2F1-204ENST00000594965 MRPS36P82909 103 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-204ENST00000594965 COX7A2LO14548 114 aa14.15□□□□□ -0.14
GTF2F1-204ENST00000594965 RPL37AP61513 92 aaKnown RBP14.15□□□□□ -0.14
GTF2F1-204ENST00000594965 RAB5AP20339 215 aa14.14□□□□□ -0.15
GTF2F1-204ENST00000594965 C5orf38Q86SI9 138 aa14.14□□□□□ -0.15
GTF2F1-204ENST00000594965 SEC11CQ9BY50 192 aa14.14□□□□□ -0.15
GTF2F1-204ENST00000594965 CTDSP1Q9GZU7 261 aa14.14□□□□□ -0.15
GTF2F1-204ENST00000594965 MAP1LC3AQ9H492 121 aa14.14□□□□□ -0.15
GTF2F1-204ENST00000594965 PKHD1L1Q86WI1 4243 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 ZNF561-AS1K7EIQ3 104 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 COMMD7Q86VX2 200 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 DPH3Q96FX2 82 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 CARD19Q96LW7 228 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 PLAC8Q9NZF1 115 aa14.13□□□□□ -0.15
GTF2F1-204ENST00000594965 IGLV4-69A0A075B6H9 119 aa14.12□□□□□ -0.15
GTF2F1-204ENST00000594965 A0A096LNI7 61 aa14.12□□□□□ -0.15
GTF2F1-204ENST00000594965 IGKV2-24A0A0C4DH68 120 aa14.12□□□□□ -0.15
GTF2F1-204ENST00000594965 MALP21145 153 aa14.12□□□□□ -0.15
GTF2F1-204ENST00000594965 Q8N8P6 123 aa14.12□□□□□ -0.15
GTF2F1-204ENST00000594965 HNRNPA3P51991 378 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-204ENST00000594965 SYCNQ0VAF6 134 aa14.11□□□□□ -0.15
GTF2F1-204ENST00000594965 PYGO1Q9Y3Y4 419 aa14.11□□□□□ -0.15
GTF2F1-204ENST00000594965 MAJINQ3KP22 176 aa14.1□□□□□ -0.15
GTF2F1-204ENST00000594965 IGLV4-3A0A075B6K6 122 aa14.09□□□□□ -0.15
GTF2F1-204ENST00000594965 IGHV3OR16-9A0A0B4J2B5 98 aa14.09□□□□□ -0.15
GTF2F1-204ENST00000594965 KRTAP29-1A8MX34 341 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms