RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
H3F3B-213ENST00000593254 UBE2L6O14933 153 aa8.53□□□□□ -1.04
H3F3B-213ENST00000593254 AMTP48728 403 aa8.53□□□□□ -1.04
H3F3B-213ENST00000593254 FOXA3P55318 350 aaPredicted RBP8.53□□□□□ -1.04
H3F3B-213ENST00000593254 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
H3F3B-213ENST00000593254 ISOC2Q96AB3 205 aa8.53□□□□□ -1.04
H3F3B-213ENST00000593254 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
H3F3B-213ENST00000593254 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
H3F3B-213ENST00000593254 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
H3F3B-213ENST00000593254 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
H3F3B-213ENST00000593254 NCR2O95944 276 aa8.51□□□□□ -1.05
H3F3B-213ENST00000593254 S100PP25815 95 aa8.51□□□□□ -1.05
H3F3B-213ENST00000593254 ADIRFQ15847 76 aa8.51□□□□□ -1.05
H3F3B-213ENST00000593254 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
H3F3B-213ENST00000593254 TRAV9-1A0A075B6T8 112 aa8.5□□□□□ -1.05
H3F3B-213ENST00000593254 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
H3F3B-213ENST00000593254 C5orf52A6NGY3 159 aa8.5□□□□□ -1.05
H3F3B-213ENST00000593254 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
H3F3B-213ENST00000593254 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 HIGD1CA8MV81 97 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 S100A6P06703 90 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
H3F3B-213ENST00000593254 OSTCQ9NRP0 149 aa8.49□□□□□ -1.05
H3F3B-213ENST00000593254 H7C423 109 aa8.48□□□□□ -1.05
H3F3B-213ENST00000593254 APCSP02743 223 aa8.48□□□□□ -1.05
H3F3B-213ENST00000593254 BORCS7Q96B45 105 aa8.48□□□□□ -1.05
H3F3B-213ENST00000593254 TMEM191AQ9H0A3 160 aa8.48□□□□□ -1.05
H3F3B-213ENST00000593254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-213ENST00000593254 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
H3F3B-213ENST00000593254 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-213ENST00000593254 GAS8-AS1O95177 125 aa8.47□□□□□ -1.05
H3F3B-213ENST00000593254 S100A8P05109 93 aa8.47□□□□□ -1.05
H3F3B-213ENST00000593254 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
H3F3B-213ENST00000593254 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
H3F3B-213ENST00000593254 SDIM1Q6ZPB5 146 aa8.47□□□□□ -1.05
H3F3B-213ENST00000593254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-213ENST00000593254 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
H3F3B-213ENST00000593254 I3L3M4 83 aa8.46□□□□□ -1.06
H3F3B-213ENST00000593254 FGF6P10767 208 aa8.46□□□□□ -1.06
H3F3B-213ENST00000593254 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
H3F3B-213ENST00000593254 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
H3F3B-213ENST00000593254 V9GYV3 84 aa8.46□□□□□ -1.06
H3F3B-213ENST00000593254 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 PANO1I0J062 215 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 SLPIP03973 132 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
H3F3B-213ENST00000593254 PMCHP20382 165 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
H3F3B-213ENST00000593254 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
H3F3B-213ENST00000593254 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 A6NJY4 79 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 PHOX2AO14813 284 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 TSHBP01222 138 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 ESDP10768 282 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 RAB4AP20338 218 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
H3F3B-213ENST00000593254 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
H3F3B-213ENST00000593254 AMN1Q8IY45 258 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 LINC00518Q8N0U6 118 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
H3F3B-213ENST00000593254 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
H3F3B-213ENST00000593254 IGHV3-64A0A075B6Q5 118 aa8.43□□□□□ -1.06
H3F3B-213ENST00000593254 SNRPEP62304 92 aaKnown RBP8.43□□□□□ -1.06
H3F3B-213ENST00000593254 COX19Q49B96 90 aa8.43□□□□□ -1.06
H3F3B-213ENST00000593254 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
H3F3B-213ENST00000593254 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 RIGQ13278 110 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
H3F3B-213ENST00000593254 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 NAT8BQ9UHF3 227 aa8.42□□□□□ -1.06
H3F3B-213ENST00000593254 TRGC2P03986 189 aa8.41□□□□□ -1.06
H3F3B-213ENST00000593254 FABP9Q0Z7S8 132 aa8.41□□□□□ -1.06
H3F3B-213ENST00000593254 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
H3F3B-213ENST00000593254 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
H3F3B-213ENST00000593254 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.06
H3F3B-213ENST00000593254 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
H3F3B-213ENST00000593254 HNRNPA3P51991 378 aaKnown RBP8.4□□□□□ -1.06
H3F3B-213ENST00000593254 FOXI1Q12951 378 aa8.4□□□□□ -1.06
H3F3B-213ENST00000593254 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
H3F3B-213ENST00000593254 NRACQ8N912 160 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms