RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TNXBP22105 4242 aa12.83□□□□□ -0.35
TRIM47-207ENST00000593089 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.36
TRIM47-207ENST00000593089 SS18Q15532 418 aa12.82□□□□□ -0.36
TRIM47-207ENST00000593089 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 HIGD1CA8MV81 97 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 TMEM191AQ9H0A3 160 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 CDC42SE2Q9NRR3 84 aa12.81□□□□□ -0.36
TRIM47-207ENST00000593089 RAB4AP20338 218 aa12.8□□□□□ -0.36
TRIM47-207ENST00000593089 POLR2KP53803 58 aaKnown RBP12.8□□□□□ -0.36
TRIM47-207ENST00000593089 EIF5A2Q9GZV4 153 aaKnown RBP12.8□□□□□ -0.36
TRIM47-207ENST00000593089 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
TRIM47-207ENST00000593089 PKIGQ9Y2B9 76 aa12.8□□□□□ -0.36
TRIM47-207ENST00000593089 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
TRIM47-207ENST00000593089 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 AKAP14Q86UN6 197 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
TRIM47-207ENST00000593089 TRBV27A0A0K0K1C4 114 aa12.78□□□□□ -0.36
TRIM47-207ENST00000593089 C7orf77A4D0Y5 90 aa12.78□□□□□ -0.36
TRIM47-207ENST00000593089 LINC01600Q96MT4 127 aa12.78□□□□□ -0.36
TRIM47-207ENST00000593089 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
TRIM47-207ENST00000593089 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
TRIM47-207ENST00000593089 SYCNQ0VAF6 134 aa12.77□□□□□ -0.37
TRIM47-207ENST00000593089 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
TRIM47-207ENST00000593089 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
TRIM47-207ENST00000593089 FCER1GP30273 86 aa12.75□□□□□ -0.37
TRIM47-207ENST00000593089 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
TRIM47-207ENST00000593089 VCYO14598 125 aa12.74□□□□□ -0.37
TRIM47-207ENST00000593089 MALP21145 153 aa12.74□□□□□ -0.37
TRIM47-207ENST00000593089 CAMPP49913 170 aa12.74□□□□□ -0.37
TRIM47-207ENST00000593089 ODF1Q14990 250 aa12.74□□□□□ -0.37
TRIM47-207ENST00000593089 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
TRIM47-207ENST00000593089 RIGQ13278 110 aa12.73□□□□□ -0.37
TRIM47-207ENST00000593089 RNASE13Q5GAN3 156 aaKnown RBP12.73□□□□□ -0.37
TRIM47-207ENST00000593089 SPINK6Q6UWN8 80 aa12.73□□□□□ -0.37
TRIM47-207ENST00000593089 V9GYV3 84 aa12.73□□□□□ -0.37
TRIM47-207ENST00000593089 SRP19P09132 144 aaKnown RBP12.72□□□□□ -0.37
TRIM47-207ENST00000593089 GAGE2BQ13066 116 aa12.72□□□□□ -0.37
TRIM47-207ENST00000593089 NUP35Q8NFH5 326 aa12.72□□□□□ -0.37
TRIM47-207ENST00000593089 ISOC2Q96AB3 205 aa12.72□□□□□ -0.37
TRIM47-207ENST00000593089 UBE2D4Q9Y2X8 147 aa12.72□□□□□ -0.37
TRIM47-207ENST00000593089 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 COX7A2LO14548 114 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 PTTG1IPP53801 180 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 SUMO2P61956 95 aaKnown RBP12.71□□□□□ -0.37
TRIM47-207ENST00000593089 Q6ZRP5 223 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 NRACQ8N912 160 aa12.71□□□□□ -0.37
TRIM47-207ENST00000593089 A0A0J9YXV3 536 aa12.7□□□□□ -0.38
TRIM47-207ENST00000593089 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
TRIM47-207ENST00000593089 KIR2DL4Q99706 377 aa12.7□□□□□ -0.38
TRIM47-207ENST00000593089 LRP2P98164 4655 aa12.7□□□□□ -0.38
TRIM47-207ENST00000593089 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
TRIM47-207ENST00000593089 PPP1R17O96001 155 aa12.69□□□□□ -0.38
TRIM47-207ENST00000593089 SMAGPQ0VAQ4 97 aa12.69□□□□□ -0.38
TRIM47-207ENST00000593089 CAMK2N2Q96S95 79 aa12.69□□□□□ -0.38
TRIM47-207ENST00000593089 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
TRIM47-207ENST00000593089 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
TRIM47-207ENST00000593089 SRSF9Q13242 221 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM47-207ENST00000593089 Q6ZUT4 128 aa12.67□□□□□ -0.38
TRIM47-207ENST00000593089 C5orf38Q86SI9 138 aa12.67□□□□□ -0.38
TRIM47-207ENST00000593089 A0A1W2PNN7 141 aa12.66□□□□□ -0.38
TRIM47-207ENST00000593089 PPP1R2P9O14990 202 aa12.66□□□□□ -0.38
TRIM47-207ENST00000593089 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
TRIM47-207ENST00000593089 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
TRIM47-207ENST00000593089 APOMO95445 188 aa12.65□□□□□ -0.38
TRIM47-207ENST00000593089 KRTAP10-8P60410 259 aa12.65□□□□□ -0.38
TRIM47-207ENST00000593089 RPL23P62829 140 aaKnown RBP12.65□□□□□ -0.38
TRIM47-207ENST00000593089 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
TRIM47-207ENST00000593089 TMEM18Q96B42 140 aa12.65□□□□□ -0.38
TRIM47-207ENST00000593089 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
TRIM47-207ENST00000593089 ADIRFQ15847 76 aa12.64□□□□□ -0.39
TRIM47-207ENST00000593089 C2orf48Q96LS8 159 aa12.64□□□□□ -0.39
TRIM47-207ENST00000593089 A0A1B0GVG6 124 aa12.63□□□□□ -0.39
TRIM47-207ENST00000593089 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.63□□□□□ -0.39
TRIM47-207ENST00000593089 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
TRIM47-207ENST00000593089 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
TRIM47-207ENST00000593089 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
TRIM47-207ENST00000593089 C9orf116Q5BN46 136 aaPredicted RBP12.62□□□□□ -0.39
TRIM47-207ENST00000593089 OPRPNQ99935 248 aaPredicted RBP12.62□□□□□ -0.39
TRIM47-207ENST00000593089 C20orf78Q9BR46 151 aa12.62□□□□□ -0.39
TRIM47-207ENST00000593089 SMIM27A0A1W2PRY6 76 aa12.61□□□□□ -0.39
TRIM47-207ENST00000593089 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
TRIM47-207ENST00000593089 CKS2P33552 79 aa12.61□□□□□ -0.39
TRIM47-207ENST00000593089 RPL39P62891 51 aaKnown RBP12.61□□□□□ -0.39
TRIM47-207ENST00000593089 NAT8Q9UHE5 227 aa12.6□□□□□ -0.39
TRIM47-207ENST00000593089 PSORS1C2Q9UIG4 136 aa12.6□□□□□ -0.39
TRIM47-207ENST00000593089 TRBV24-1A0A075B6N3 115 aa12.59□□□□□ -0.39
TRIM47-207ENST00000593089 TNFRSF6BO95407 300 aa12.59□□□□□ -0.39
TRIM47-207ENST00000593089 MT-ND6P03923 174 aa12.59□□□□□ -0.39
TRIM47-207ENST00000593089 C9JQL5 133 aa12.58□□□□□ -0.4
TRIM47-207ENST00000593089 PHF5AQ7RTV0 110 aaKnown RBP12.58□□□□□ -0.4
TRIM47-207ENST00000593089 OR10D4PQ8NGN7 298 aa12.58□□□□□ -0.4
TRIM47-207ENST00000593089 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
TRIM47-207ENST00000593089 A0A1B0GW15 77 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms