RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CHCHD10Q8WYQ3 142 aaPredicted RBP17.61■□□□□ 0.41
SMAD4-213ENST00000591914 C20orf78Q9BR46 151 aa17.61■□□□□ 0.41
SMAD4-213ENST00000591914 hDV102S1A0JD36 115 aa17.6■□□□□ 0.41
SMAD4-213ENST00000591914 CNBPP62633 177 aaKnown RBP17.6■□□□□ 0.41
SMAD4-213ENST00000591914 ATP5L2Q7Z4Y8 100 aa17.6■□□□□ 0.41
SMAD4-213ENST00000591914 KIR2DL4Q99706 377 aa17.6■□□□□ 0.41
SMAD4-213ENST00000591914 RPL32P62910 135 aaKnown RBP17.59■□□□□ 0.41
SMAD4-213ENST00000591914 IFITM2Q01629 132 aa17.59■□□□□ 0.41
SMAD4-213ENST00000591914 INAFM2P0DMQ5 153 aa17.58■□□□□ 0.4
SMAD4-213ENST00000591914 CDC42SE2Q9NRR3 84 aa17.58■□□□□ 0.4
SMAD4-213ENST00000591914 D6R8Y8 96 aa17.57■□□□□ 0.4
SMAD4-213ENST00000591914 TNFRSF6BO95407 300 aa17.57■□□□□ 0.4
SMAD4-213ENST00000591914 MT-ND4LP03901 98 aa17.57■□□□□ 0.4
SMAD4-213ENST00000591914 C15orf56Q8N910 161 aa17.57■□□□□ 0.4
SMAD4-213ENST00000591914 ANAPC16Q96DE5 110 aa17.57■□□□□ 0.4
SMAD4-213ENST00000591914 CIRBP-AS1Q8TBR5 109 aa17.56■□□□□ 0.4
SMAD4-213ENST00000591914 LINC00959A0A1B0GUT2 108 aa17.55■□□□□ 0.4
SMAD4-213ENST00000591914 CFAP161Q6P656 301 aa17.55■□□□□ 0.4
SMAD4-213ENST00000591914 ZNF664Q8N3J9 261 aa17.55■□□□□ 0.4
SMAD4-213ENST00000591914 CSDC2Q9Y534 153 aaKnown RBP17.55■□□□□ 0.4
SMAD4-213ENST00000591914 PPBPP02775 128 aa17.54■□□□□ 0.4
SMAD4-213ENST00000591914 SLPIP03973 132 aa17.54■□□□□ 0.4
SMAD4-213ENST00000591914 FOXI1Q12951 378 aa17.54■□□□□ 0.4
SMAD4-213ENST00000591914 LINC00528Q8N1L1 170 aa17.54■□□□□ 0.4
SMAD4-213ENST00000591914 AP5S1Q9NUS5 200 aa17.54■□□□□ 0.4
SMAD4-213ENST00000591914 PHOX2AO14813 284 aa17.53■□□□□ 0.4
SMAD4-213ENST00000591914 SDIM1Q6ZPB5 146 aa17.53■□□□□ 0.4
SMAD4-213ENST00000591914 SMIM2Q9BVW6 85 aa17.53■□□□□ 0.4
SMAD4-213ENST00000591914 UBE2D4Q9Y2X8 147 aa17.53■□□□□ 0.4
SMAD4-213ENST00000591914 NPYP01303 97 aa17.52■□□□□ 0.4
SMAD4-213ENST00000591914 SMAGPQ0VAQ4 97 aa17.52■□□□□ 0.4
SMAD4-213ENST00000591914 UQCC3Q6UW78 93 aa17.52■□□□□ 0.4
SMAD4-213ENST00000591914 TCAPO15273 167 aa17.51■□□□□ 0.39
SMAD4-213ENST00000591914 CCL25O15444 150 aa17.51■□□□□ 0.39
SMAD4-213ENST00000591914 XCL1P47992 114 aa17.51■□□□□ 0.39
SMAD4-213ENST00000591914 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-213ENST00000591914 ORMDL3Q8N138 153 aa17.5■□□□□ 0.39
SMAD4-213ENST00000591914 PLA2G1BP04054 148 aaKnown RBP17.49■□□□□ 0.39
SMAD4-213ENST00000591914 ADCYAP1P18509 176 aa17.49■□□□□ 0.39
SMAD4-213ENST00000591914 SS18Q15532 418 aa17.49■□□□□ 0.39
SMAD4-213ENST00000591914 TMEM18Q96B42 140 aa17.49■□□□□ 0.39
SMAD4-213ENST00000591914 TIMM21Q9BVV7 248 aa17.49■□□□□ 0.39
SMAD4-213ENST00000591914 GVQW2A0A096LPI5 108 aaPredicted RBP17.48■□□□□ 0.39
SMAD4-213ENST00000591914 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.48■□□□□ 0.39
SMAD4-213ENST00000591914 IGHV3-64A0A075B6Q5 118 aa17.47■□□□□ 0.39
SMAD4-213ENST00000591914 HIGD2BQ4VC39 106 aa17.47■□□□□ 0.39
SMAD4-213ENST00000591914 TMEM136Q6ZRR5 245 aa17.47■□□□□ 0.39
SMAD4-213ENST00000591914 TMEM218A2RU14 115 aa17.46■□□□□ 0.39
SMAD4-213ENST00000591914 CD164L2Q6UWJ8 174 aa17.46■□□□□ 0.39
SMAD4-213ENST00000591914 PRELID3AQ96N28 172 aa17.46■□□□□ 0.39
SMAD4-213ENST00000591914 PANO1I0J062 215 aa17.45■□□□□ 0.38
SMAD4-213ENST00000591914 CIRBPQ14011 172 aaKnown RBP17.44■□□□□ 0.38
SMAD4-213ENST00000591914 Q6ZUT4 128 aa17.44■□□□□ 0.38
SMAD4-213ENST00000591914 MYCBP2O75592 4640 aa17.44■□□□□ 0.38
SMAD4-213ENST00000591914 C1orf196B1AJZ1 125 aa17.43■□□□□ 0.38
SMAD4-213ENST00000591914 RPL39P62891 51 aaKnown RBP17.43■□□□□ 0.38
SMAD4-213ENST00000591914 RNASE13Q5GAN3 156 aaKnown RBP17.43■□□□□ 0.38
SMAD4-213ENST00000591914 IGHV1-58A0A0C4DH39 117 aa17.42■□□□□ 0.38
SMAD4-213ENST00000591914 IMMP2LQ96T52 175 aa17.42■□□□□ 0.38
SMAD4-213ENST00000591914 LAMTOR2Q9Y2Q5 125 aa17.42■□□□□ 0.38
SMAD4-213ENST00000591914 FLG2Q5D862 2391 aaPredicted RBP17.42■□□□□ 0.38
SMAD4-213ENST00000591914 PRSS47A8MTI9 375 aa17.41■□□□□ 0.38
SMAD4-213ENST00000591914 SPANXA1Q9NS26 97 aa17.41■□□□□ 0.38
SMAD4-213ENST00000591914 FAM104AQ969W3 186 aa17.4■□□□□ 0.38
SMAD4-213ENST00000591914 KRTAP10-4P60372 401 aaPredicted RBP17.39■□□□□ 0.37
SMAD4-213ENST00000591914 SEC11CQ9BY50 192 aa17.39■□□□□ 0.37
SMAD4-213ENST00000591914 TRAV13-1A0A0B4J241 112 aa17.38■□□□□ 0.37
SMAD4-213ENST00000591914 CTDSP1Q9GZU7 261 aa17.38■□□□□ 0.37
SMAD4-213ENST00000591914 RAB5AP20339 215 aa17.37■□□□□ 0.37
SMAD4-213ENST00000591914 MRPS36P82909 103 aaKnown RBP17.36■□□□□ 0.37
SMAD4-213ENST00000591914 COMMD7Q86VX2 200 aa17.36■□□□□ 0.37
SMAD4-213ENST00000591914 MAP1LC3AQ9H492 121 aa17.36■□□□□ 0.37
SMAD4-213ENST00000591914 COX7A2LO14548 114 aa17.35■□□□□ 0.37
SMAD4-213ENST00000591914 CHTF8P0CG12 524 aa17.35■□□□□ 0.37
SMAD4-213ENST00000591914 SPACA4Q8TDM5 124 aa17.35■□□□□ 0.37
SMAD4-213ENST00000591914 COX6A2Q02221 97 aa17.34■□□□□ 0.37
SMAD4-213ENST00000591914 LINC00526Q96FQ7 95 aa17.34■□□□□ 0.37
SMAD4-213ENST00000591914 OPRPNQ99935 248 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-213ENST00000591914 LOC389332A0A1B0GUA5 103 aa17.33■□□□□ 0.36
SMAD4-213ENST00000591914 TRAV9-1A0A075B6T8 112 aa17.32■□□□□ 0.36
SMAD4-213ENST00000591914 MALP21145 153 aa17.32■□□□□ 0.36
SMAD4-213ENST00000591914 PRSS3P2Q8NHM4 247 aa17.32■□□□□ 0.36
SMAD4-213ENST00000591914 ZNF561-AS1K7EIQ3 104 aa17.31■□□□□ 0.36
SMAD4-213ENST00000591914 Q8N8P6 123 aa17.31■□□□□ 0.36
SMAD4-213ENST00000591914 PYGO1Q9Y3Y4 419 aa17.31■□□□□ 0.36
SMAD4-213ENST00000591914 DMBT1Q9UGM3 2413 aaPredicted RBP17.31■□□□□ 0.36
SMAD4-213ENST00000591914 A0A087WYN8 130 aa17.3■□□□□ 0.36
SMAD4-213ENST00000591914 IFI27P40305 119 aaPredicted RBP17.29■□□□□ 0.36
SMAD4-213ENST00000591914 C10orf91Q5T1B1 145 aa17.29■□□□□ 0.36
SMAD4-213ENST00000591914 DPH3Q96FX2 82 aa17.29■□□□□ 0.36
SMAD4-213ENST00000591914 CARD19Q96LW7 228 aa17.29■□□□□ 0.36
SMAD4-213ENST00000591914 RPL37AP61513 92 aaKnown RBP17.28■□□□□ 0.36
SMAD4-213ENST00000591914 C5orf38Q86SI9 138 aa17.28■□□□□ 0.36
SMAD4-213ENST00000591914 PLAC8Q9NZF1 115 aa17.28■□□□□ 0.36
SMAD4-213ENST00000591914 IFITM10A6NMD0 228 aa17.27■□□□□ 0.36
SMAD4-213ENST00000591914 SYCNQ0VAF6 134 aa17.27■□□□□ 0.36
SMAD4-213ENST00000591914 HERC1Q15751 4861 aa17.26■□□□□ 0.35
SMAD4-213ENST00000591914 IGLV4-69A0A075B6H9 119 aa17.26■□□□□ 0.35
SMAD4-213ENST00000591914 K7EMI3 77 aa17.26■□□□□ 0.35
SMAD4-213ENST00000591914 IGLV4-3A0A075B6K6 122 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms