RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
DDX39A-215ENST00000590696 LINC00474Q9P2X8 69 aa13.61□□□□□ -0.23
DDX39A-215ENST00000590696 SS18Q15532 418 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 ALKAL2Q6UX46 152 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 CARD19Q96LW7 228 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 LINC01600Q96MT4 127 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 CDC42SE2Q9NRR3 84 aa13.6□□□□□ -0.23
DDX39A-215ENST00000590696 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
DDX39A-215ENST00000590696 TMEM191AQ9H0A3 160 aa13.59□□□□□ -0.23
DDX39A-215ENST00000590696 PKIGQ9Y2B9 76 aa13.59□□□□□ -0.23
DDX39A-215ENST00000590696 A0A1B0GUT8 65 aa13.58□□□□□ -0.24
DDX39A-215ENST00000590696 HIGD1CA8MV81 97 aa13.58□□□□□ -0.24
DDX39A-215ENST00000590696 RAB4AP20338 218 aa13.58□□□□□ -0.24
DDX39A-215ENST00000590696 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
DDX39A-215ENST00000590696 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.24
DDX39A-215ENST00000590696 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
DDX39A-215ENST00000590696 ZNF561-AS1K7EIQ3 104 aa13.57□□□□□ -0.24
DDX39A-215ENST00000590696 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
DDX39A-215ENST00000590696 TSKUQ8WUA8 353 aa13.57□□□□□ -0.24
DDX39A-215ENST00000590696 SYCNQ0VAF6 134 aa13.56□□□□□ -0.24
DDX39A-215ENST00000590696 SMIM7Q9BQ49 75 aa13.56□□□□□ -0.24
DDX39A-215ENST00000590696 C7orf77A4D0Y5 90 aa13.55□□□□□ -0.24
DDX39A-215ENST00000590696 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
DDX39A-215ENST00000590696 AMN1Q8IY45 258 aa13.55□□□□□ -0.24
DDX39A-215ENST00000590696 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
DDX39A-215ENST00000590696 EIF5A2Q9GZV4 153 aaKnown RBP13.54□□□□□ -0.24
DDX39A-215ENST00000590696 SMKR1H3BMG3 65 aa13.53□□□□□ -0.24
DDX39A-215ENST00000590696 ODF1Q14990 250 aa13.53□□□□□ -0.24
DDX39A-215ENST00000590696 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
DDX39A-215ENST00000590696 LRP2P98164 4655 aa13.52□□□□□ -0.24
DDX39A-215ENST00000590696 A0A0J9YXV3 536 aa13.52□□□□□ -0.25
DDX39A-215ENST00000590696 VCYO14598 125 aa13.52□□□□□ -0.25
DDX39A-215ENST00000590696 CAMPP49913 170 aa13.52□□□□□ -0.25
DDX39A-215ENST00000590696 IGLV4-69A0A075B6H9 119 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 ZNF727A8MUV8 499 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 MALP21145 153 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 FCER1GP30273 86 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 REG3GQ6UW15 175 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 Q6ZRP5 223 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 AKAP14Q86UN6 197 aa13.51□□□□□ -0.25
DDX39A-215ENST00000590696 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
DDX39A-215ENST00000590696 PTTG1IPP53801 180 aa13.5□□□□□ -0.25
DDX39A-215ENST00000590696 GAGE2BQ13066 116 aa13.5□□□□□ -0.25
DDX39A-215ENST00000590696 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDX39A-215ENST00000590696 ISOC2Q96AB3 205 aa13.5□□□□□ -0.25
DDX39A-215ENST00000590696 LOC107984640A0A0U1RRK4 108 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 COX7A2LO14548 114 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 RIGQ13278 110 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
DDX39A-215ENST00000590696 NUP35Q8NFH5 326 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 UBE2D4Q9Y2X8 147 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 V9GYV3 84 aa13.49□□□□□ -0.25
DDX39A-215ENST00000590696 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
DDX39A-215ENST00000590696 KRTAP10-8P60410 259 aa13.48□□□□□ -0.25
DDX39A-215ENST00000590696 NRACQ8N912 160 aa13.48□□□□□ -0.25
DDX39A-215ENST00000590696 CSDC2Q9Y534 153 aaKnown RBP13.48□□□□□ -0.25
DDX39A-215ENST00000590696 PPP1R17O96001 155 aa13.47□□□□□ -0.25
DDX39A-215ENST00000590696 SUMO2P61956 95 aaKnown RBP13.47□□□□□ -0.25
DDX39A-215ENST00000590696 SMAGPQ0VAQ4 97 aa13.47□□□□□ -0.25
DDX39A-215ENST00000590696 TRAV13-1A0A0B4J241 112 aa13.46□□□□□ -0.25
DDX39A-215ENST00000590696 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
DDX39A-215ENST00000590696 KIR2DL4Q99706 377 aa13.46□□□□□ -0.25
DDX39A-215ENST00000590696 A0A1W2PNN7 141 aa13.45□□□□□ -0.26
DDX39A-215ENST00000590696 hCG_2014768A0A024R1R8 64 aa13.44□□□□□ -0.26
DDX39A-215ENST00000590696 C5orf38Q86SI9 138 aa13.44□□□□□ -0.26
DDX39A-215ENST00000590696 RNF213Q63HN8 5207 aa13.43□□□□□ -0.26
DDX39A-215ENST00000590696 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
DDX39A-215ENST00000590696 Q6ZUT4 128 aa13.43□□□□□ -0.26
DDX39A-215ENST00000590696 C2orf48Q96LS8 159 aa13.43□□□□□ -0.26
DDX39A-215ENST00000590696 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
DDX39A-215ENST00000590696 APOMO95445 188 aa13.42□□□□□ -0.26
DDX39A-215ENST00000590696 MRPL51Q4U2R6 128 aaKnown RBP13.42□□□□□ -0.26
DDX39A-215ENST00000590696 FAM104BQ5XKR9 115 aa13.42□□□□□ -0.26
DDX39A-215ENST00000590696 TMEM18Q96B42 140 aa13.42□□□□□ -0.26
DDX39A-215ENST00000590696 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-215ENST00000590696 TMEM241Q24JQ0 296 aa13.41□□□□□ -0.26
DDX39A-215ENST00000590696 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
DDX39A-215ENST00000590696 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
DDX39A-215ENST00000590696 RPL18AQ02543 176 aaKnown RBP13.4□□□□□ -0.26
DDX39A-215ENST00000590696 C9orf116Q5BN46 136 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-215ENST00000590696 SPAG11BQ08648 103 aa13.39□□□□□ -0.27
DDX39A-215ENST00000590696 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-215ENST00000590696 PSORS1C2Q9UIG4 136 aa13.39□□□□□ -0.27
DDX39A-215ENST00000590696 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
DDX39A-215ENST00000590696 FAM74A3Q4VXF1 159 aa13.38□□□□□ -0.27
DDX39A-215ENST00000590696 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
DDX39A-215ENST00000590696 SMIM27A0A1W2PRY6 76 aa13.37□□□□□ -0.27
DDX39A-215ENST00000590696 MT-ND6P03923 174 aa13.37□□□□□ -0.27
DDX39A-215ENST00000590696 CKS2P33552 79 aa13.37□□□□□ -0.27
DDX39A-215ENST00000590696 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
DDX39A-215ENST00000590696 ADIRFQ15847 76 aa13.37□□□□□ -0.27
DDX39A-215ENST00000590696 TRBV24-1A0A075B6N3 115 aa13.36□□□□□ -0.27
DDX39A-215ENST00000590696 RNF151Q2KHN1 245 aa13.36□□□□□ -0.27
DDX39A-215ENST00000590696 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
DDX39A-215ENST00000590696 OR10D4PQ8NGN7 298 aa13.36□□□□□ -0.27
DDX39A-215ENST00000590696 RPL32P62910 135 aaKnown RBP13.35□□□□□ -0.27
DDX39A-215ENST00000590696 FAM104AQ969W3 186 aa13.35□□□□□ -0.27
DDX39A-215ENST00000590696 TCAPO15273 167 aa13.34□□□□□ -0.27
DDX39A-215ENST00000590696 TNFRSF6BO95407 300 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms