RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 CDC42SE2Q9NRR3 84 aa13.72□□□□□ -0.21
LRP3-202ENST00000590275 CNBPP62633 177 aaKnown RBP13.71□□□□□ -0.21
LRP3-202ENST00000590275 HBBP68871 147 aa13.71□□□□□ -0.21
LRP3-202ENST00000590275 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
LRP3-202ENST00000590275 LINC00959A0A1B0GUT2 108 aa13.7□□□□□ -0.22
LRP3-202ENST00000590275 A0A1B0GW15 77 aa13.7□□□□□ -0.22
LRP3-202ENST00000590275 C7orf77A4D0Y5 90 aa13.7□□□□□ -0.22
LRP3-202ENST00000590275 RAB14P61106 215 aa13.7□□□□□ -0.22
LRP3-202ENST00000590275 D6R8Y8 96 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 TNFRSF6BO95407 300 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 NPYP01303 97 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 ADCYAP1P18509 176 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 CKS2P33552 79 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 UBE2D4Q9Y2X8 147 aa13.69□□□□□ -0.22
LRP3-202ENST00000590275 LINC00862A6NCI5 91 aa13.68□□□□□ -0.22
LRP3-202ENST00000590275 RNASE13Q5GAN3 156 aaKnown RBP13.68□□□□□ -0.22
LRP3-202ENST00000590275 FLG2Q5D862 2391 aaPredicted RBP13.67□□□□□ -0.22
LRP3-202ENST00000590275 CCL25O15444 150 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 FCER1GP30273 86 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 XCL1P47992 114 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 ZNF664Q8N3J9 261 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 BTF3L4Q96K17 158 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 C20orf78Q9BR46 151 aa13.67□□□□□ -0.22
LRP3-202ENST00000590275 PPP1R17O96001 155 aa13.66□□□□□ -0.22
LRP3-202ENST00000590275 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
LRP3-202ENST00000590275 PPP1R2P9O14990 202 aa13.65□□□□□ -0.22
LRP3-202ENST00000590275 PNRC1Q12796 327 aaPredicted RBP13.65□□□□□ -0.22
LRP3-202ENST00000590275 PKHD1L1Q86WI1 4243 aa13.65□□□□□ -0.22
LRP3-202ENST00000590275 CHTF8P0CG12 524 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
LRP3-202ENST00000590275 Q6ZUT4 128 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 ATP5L2Q7Z4Y8 100 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 LINC00526Q96FQ7 95 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 KIR2DL4Q99706 377 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
LRP3-202ENST00000590275 F8W036 122 aa13.63□□□□□ -0.23
LRP3-202ENST00000590275 LRP1Q07954 4544 aaKnown RBP13.63□□□□□ -0.23
LRP3-202ENST00000590275 GVQW2A0A096LPI5 108 aaPredicted RBP13.62□□□□□ -0.23
LRP3-202ENST00000590275 TCAPO15273 167 aa13.62□□□□□ -0.23
LRP3-202ENST00000590275 S100A8P05109 93 aa13.62□□□□□ -0.23
LRP3-202ENST00000590275 CIRBPQ14011 172 aaKnown RBP13.62□□□□□ -0.23
LRP3-202ENST00000590275 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
LRP3-202ENST00000590275 CSDC2Q9Y534 153 aaKnown RBP13.62□□□□□ -0.23
LRP3-202ENST00000590275 MT-ND4LP03901 98 aa13.61□□□□□ -0.23
LRP3-202ENST00000590275 OPRPNQ99935 248 aaPredicted RBP13.61□□□□□ -0.23
LRP3-202ENST00000590275 AP5S1Q9NUS5 200 aa13.61□□□□□ -0.23
LRP3-202ENST00000590275 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
LRP3-202ENST00000590275 TMEM136Q6ZRR5 245 aa13.6□□□□□ -0.23
LRP3-202ENST00000590275 FAT3Q8TDW7 4589 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 TMEM218A2RU14 115 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 PLA2G1BP04054 148 aaKnown RBP13.59□□□□□ -0.23
LRP3-202ENST00000590275 CD164L2Q6UWJ8 174 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 PRELID3AQ96N28 172 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 TIMM21Q9BVV7 248 aa13.59□□□□□ -0.23
LRP3-202ENST00000590275 PHOX2AO14813 284 aa13.58□□□□□ -0.24
LRP3-202ENST00000590275 PPBPP02775 128 aa13.58□□□□□ -0.24
LRP3-202ENST00000590275 SS18Q15532 418 aa13.58□□□□□ -0.24
LRP3-202ENST00000590275 ORMDL3Q8N138 153 aa13.58□□□□□ -0.24
LRP3-202ENST00000590275 PRSS3P2Q8NHM4 247 aa13.58□□□□□ -0.24
LRP3-202ENST00000590275 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
LRP3-202ENST00000590275 TRAV13-1A0A0B4J241 112 aa13.56□□□□□ -0.24
LRP3-202ENST00000590275 COX6A2Q02221 97 aa13.56□□□□□ -0.24
LRP3-202ENST00000590275 UQCC3Q6UW78 93 aa13.56□□□□□ -0.24
LRP3-202ENST00000590275 SPACA4Q8TDM5 124 aa13.56□□□□□ -0.24
LRP3-202ENST00000590275 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
LRP3-202ENST00000590275 HNRNPA3P51991 378 aaKnown RBP13.55□□□□□ -0.24
LRP3-202ENST00000590275 A0A087WYN8 130 aa13.54□□□□□ -0.24
LRP3-202ENST00000590275 LOC389332A0A1B0GUA5 103 aa13.54□□□□□ -0.24
LRP3-202ENST00000590275 PRSS47A8MTI9 375 aa13.54□□□□□ -0.24
LRP3-202ENST00000590275 C1orf196B1AJZ1 125 aa13.53□□□□□ -0.24
LRP3-202ENST00000590275 C5orf38Q86SI9 138 aa13.52□□□□□ -0.25
LRP3-202ENST00000590275 COMMD7Q86VX2 200 aa13.52□□□□□ -0.25
LRP3-202ENST00000590275 TMEM18Q96B42 140 aa13.51□□□□□ -0.25
LRP3-202ENST00000590275 SPANXA1Q9NS26 97 aa13.51□□□□□ -0.25
LRP3-202ENST00000590275 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
LRP3-202ENST00000590275 A0A096LNI7 61 aa13.5□□□□□ -0.25
LRP3-202ENST00000590275 RPL37AP61513 92 aaKnown RBP13.5□□□□□ -0.25
LRP3-202ENST00000590275 MRPS36P82909 103 aaKnown RBP13.5□□□□□ -0.25
LRP3-202ENST00000590275 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 COX7A2LO14548 114 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 IMMP2LQ96T52 175 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 SEC11CQ9BY50 192 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 PLAC8Q9NZF1 115 aa13.49□□□□□ -0.25
LRP3-202ENST00000590275 IGKV2-24A0A0C4DH68 120 aa13.48□□□□□ -0.25
LRP3-202ENST00000590275 KIAA1644Q3SXP7 199 aa13.48□□□□□ -0.25
LRP3-202ENST00000590275 IGLV4-3A0A075B6K6 122 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 C10orf91Q5T1B1 145 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 ZC2HC1BQ5TFG8 222 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 Q6ZRU5 148 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 Q8N8P6 123 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 MAP1LC3AQ9H492 121 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
LRP3-202ENST00000590275 IGHV3OR16-9A0A0B4J2B5 98 aa13.46□□□□□ -0.25
LRP3-202ENST00000590275 RAB5AP20339 215 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms