RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 LYPD6BQ8NI32 183 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 SMIM7Q9BQ49 75 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
PRKCSH-211ENST00000590098 GAS8-AS1O95177 125 aa11.29□□□□□ -0.6
PRKCSH-211ENST00000590098 TSKUQ8WUA8 353 aa11.29□□□□□ -0.6
PRKCSH-211ENST00000590098 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
PRKCSH-211ENST00000590098 A0A096LNI7 61 aa11.28□□□□□ -0.6
PRKCSH-211ENST00000590098 TNXBP22105 4242 aa11.27□□□□□ -0.6
PRKCSH-211ENST00000590098 RAB4AP20338 218 aa11.27□□□□□ -0.61
PRKCSH-211ENST00000590098 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.61
PRKCSH-211ENST00000590098 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
PRKCSH-211ENST00000590098 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
PRKCSH-211ENST00000590098 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.61
PRKCSH-211ENST00000590098 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 C7orf77A4D0Y5 90 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 OSTCQ9NRP0 149 aa11.26□□□□□ -0.61
PRKCSH-211ENST00000590098 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
PRKCSH-211ENST00000590098 VCYO14598 125 aa11.24□□□□□ -0.61
PRKCSH-211ENST00000590098 FCER1GP30273 86 aa11.24□□□□□ -0.61
PRKCSH-211ENST00000590098 SYCNQ0VAF6 134 aa11.24□□□□□ -0.61
PRKCSH-211ENST00000590098 RIGQ13278 110 aa11.24□□□□□ -0.61
PRKCSH-211ENST00000590098 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
PRKCSH-211ENST00000590098 PPP1R17O96001 155 aa11.23□□□□□ -0.61
PRKCSH-211ENST00000590098 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
PRKCSH-211ENST00000590098 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
PRKCSH-211ENST00000590098 SMKR1H3BMG3 65 aa11.22□□□□□ -0.61
PRKCSH-211ENST00000590098 MALP21145 153 aa11.22□□□□□ -0.61
PRKCSH-211ENST00000590098 ISOC2Q96AB3 205 aa11.22□□□□□ -0.61
PRKCSH-211ENST00000590098 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
PRKCSH-211ENST00000590098 CAMPP49913 170 aa11.21□□□□□ -0.61
PRKCSH-211ENST00000590098 NUP35Q8NFH5 326 aa11.21□□□□□ -0.61
PRKCSH-211ENST00000590098 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
PRKCSH-211ENST00000590098 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
PRKCSH-211ENST00000590098 COX7A2LO14548 114 aa11.2□□□□□ -0.62
PRKCSH-211ENST00000590098 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
PRKCSH-211ENST00000590098 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
PRKCSH-211ENST00000590098 V9GYV3 84 aa11.2□□□□□ -0.62
PRKCSH-211ENST00000590098 NAT8BQ9UHF3 227 aa11.19□□□□□ -0.62
PRKCSH-211ENST00000590098 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 PPP1R2P9O14990 202 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 TMEM241Q24JQ0 296 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 REG3GQ6UW15 175 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 SPINK6Q6UWN8 80 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 Q6ZRP5 223 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 NRACQ8N912 160 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
PRKCSH-211ENST00000590098 PTTG1IPP53801 180 aa11.17□□□□□ -0.62
PRKCSH-211ENST00000590098 GAGE2BQ13066 116 aa11.17□□□□□ -0.62
PRKCSH-211ENST00000590098 FAM74A3Q4VXF1 159 aa11.17□□□□□ -0.62
PRKCSH-211ENST00000590098 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
PRKCSH-211ENST00000590098 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
PRKCSH-211ENST00000590098 ODF1Q14990 250 aa11.16□□□□□ -0.62
PRKCSH-211ENST00000590098 RNASE13Q5GAN3 156 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-211ENST00000590098 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
PRKCSH-211ENST00000590098 APOMO95445 188 aa11.15□□□□□ -0.62
PRKCSH-211ENST00000590098 ADIRFQ15847 76 aa11.15□□□□□ -0.62
PRKCSH-211ENST00000590098 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-211ENST00000590098 FAM104BQ5XKR9 115 aa11.15□□□□□ -0.62
PRKCSH-211ENST00000590098 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
PRKCSH-211ENST00000590098 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-211ENST00000590098 C5orf38Q86SI9 138 aa11.14□□□□□ -0.63
PRKCSH-211ENST00000590098 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
PRKCSH-211ENST00000590098 LRP2P98164 4655 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 LINC00862A6NCI5 91 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 CKS2P33552 79 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 Q6ZUT4 128 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 NAT8Q9UHE5 227 aa11.13□□□□□ -0.63
PRKCSH-211ENST00000590098 A0A1B0GW15 77 aa11.12□□□□□ -0.63
PRKCSH-211ENST00000590098 TCAPO15273 167 aa11.12□□□□□ -0.63
PRKCSH-211ENST00000590098 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRKCSH-211ENST00000590098 SMIM27A0A1W2PRY6 76 aa11.11□□□□□ -0.63
PRKCSH-211ENST00000590098 SPAG11BQ08648 103 aa11.11□□□□□ -0.63
PRKCSH-211ENST00000590098 TRBV24-1A0A075B6N3 115 aa11.1□□□□□ -0.63
PRKCSH-211ENST00000590098 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
PRKCSH-211ENST00000590098 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
PRKCSH-211ENST00000590098 RPL18AQ02543 176 aaKnown RBP11.1□□□□□ -0.63
PRKCSH-211ENST00000590098 RNF213Q63HN8 5207 aa11.09□□□□□ -0.63
PRKCSH-211ENST00000590098 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
PRKCSH-211ENST00000590098 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
PRKCSH-211ENST00000590098 RPL32P62910 135 aaKnown RBP11.09□□□□□ -0.63
PRKCSH-211ENST00000590098 C9orf116Q5BN46 136 aaPredicted RBP11.09□□□□□ -0.63
PRKCSH-211ENST00000590098 C9JQL5 133 aa11.08□□□□□ -0.64
PRKCSH-211ENST00000590098 F8W036 122 aa11.08□□□□□ -0.64
PRKCSH-211ENST00000590098 S100A8P05109 93 aa11.08□□□□□ -0.64
PRKCSH-211ENST00000590098 RPL39P62891 51 aaKnown RBP11.08□□□□□ -0.64
PRKCSH-211ENST00000590098 PEA15Q15121 130 aa11.08□□□□□ -0.64
PRKCSH-211ENST00000590098 OR10D4PQ8NGN7 298 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms