RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
NEDD4L-225ENST00000589054 CT83Q5H943 113 aa13.29□□□□□ -0.28
NEDD4L-225ENST00000589054 ST20Q9HBF5 79 aa13.29□□□□□ -0.28
NEDD4L-225ENST00000589054 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 LINC01551Q86U37 167 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 LINC01600Q96MT4 127 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 TMEM191AQ9H0A3 160 aa13.28□□□□□ -0.28
NEDD4L-225ENST00000589054 RNF213Q63HN8 5207 aa13.27□□□□□ -0.28
NEDD4L-225ENST00000589054 BLOC1S1P78537 153 aa13.27□□□□□ -0.29
NEDD4L-225ENST00000589054 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-225ENST00000589054 TSKUQ8WUA8 353 aa13.27□□□□□ -0.29
NEDD4L-225ENST00000589054 IGHV1-58A0A0C4DH39 117 aa13.26□□□□□ -0.29
NEDD4L-225ENST00000589054 TRBV27A0A0K0K1C4 114 aa13.26□□□□□ -0.29
NEDD4L-225ENST00000589054 A0A1B0GUT8 65 aa13.26□□□□□ -0.29
NEDD4L-225ENST00000589054 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
NEDD4L-225ENST00000589054 BTF3L4Q96K17 158 aa13.26□□□□□ -0.29
NEDD4L-225ENST00000589054 ZNF664Q8N3J9 261 aa13.25□□□□□ -0.29
NEDD4L-225ENST00000589054 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
NEDD4L-225ENST00000589054 CARD19Q96LW7 228 aa13.25□□□□□ -0.29
NEDD4L-225ENST00000589054 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.296e-8■■■■□ 23.6
NEDD4L-225ENST00000589054 CD164L2Q6UWJ8 174 aa13.24□□□□□ -0.29
NEDD4L-225ENST00000589054 SMIM7Q9BQ49 75 aa13.24□□□□□ -0.29
NEDD4L-225ENST00000589054 SRP19P09132 144 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-225ENST00000589054 RNASE13Q5GAN3 156 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-225ENST00000589054 NRACQ8N912 160 aa13.23□□□□□ -0.29
NEDD4L-225ENST00000589054 OSTCQ9NRP0 149 aa13.23□□□□□ -0.29
NEDD4L-225ENST00000589054 V9GYV3 84 aa13.23□□□□□ -0.29
NEDD4L-225ENST00000589054 KRTAP10-8P60410 259 aa13.22□□□□□ -0.29
NEDD4L-225ENST00000589054 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
NEDD4L-225ENST00000589054 SS18Q15532 418 aa13.22□□□□□ -0.29
NEDD4L-225ENST00000589054 A0A1W2PNN7 141 aa13.21□□□□□ -0.29
NEDD4L-225ENST00000589054 C7orf77A4D0Y5 90 aa13.21□□□□□ -0.29
NEDD4L-225ENST00000589054 NUP35Q8NFH5 326 aa13.21□□□□□ -0.29
NEDD4L-225ENST00000589054 EIF5A2Q9GZV4 153 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-225ENST00000589054 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
NEDD4L-225ENST00000589054 ZNF727A8MUV8 499 aa13.2□□□□□ -0.3
NEDD4L-225ENST00000589054 BORCS7Q96B45 105 aa13.2□□□□□ -0.3
NEDD4L-225ENST00000589054 FAM210AQ96ND0 272 aa13.2□□□□□ -0.3
NEDD4L-225ENST00000589054 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
NEDD4L-225ENST00000589054 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
NEDD4L-225ENST00000589054 CAMPP49913 170 aa13.19□□□□□ -0.3
NEDD4L-225ENST00000589054 PTTG1IPP53801 180 aa13.19□□□□□ -0.3
NEDD4L-225ENST00000589054 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
NEDD4L-225ENST00000589054 LINC00474Q9P2X8 69 aa13.19□□□□□ -0.3
NEDD4L-225ENST00000589054 ZNF561-AS1K7EIQ3 104 aa13.18□□□□□ -0.3
NEDD4L-225ENST00000589054 VCYO14598 125 aa13.18□□□□□ -0.3
NEDD4L-225ENST00000589054 C9JQL5 133 aa13.17□□□□□ -0.3
NEDD4L-225ENST00000589054 GAGE2BQ13066 116 aa13.17□□□□□ -0.3
NEDD4L-225ENST00000589054 SPINK6Q6UWN8 80 aa13.17□□□□□ -0.3
NEDD4L-225ENST00000589054 SUMO2P61956 95 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-225ENST00000589054 MRPL51Q4U2R6 128 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-225ENST00000589054 Q6ZUT4 128 aa13.16□□□□□ -0.3
NEDD4L-225ENST00000589054 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
NEDD4L-225ENST00000589054 TRAV13-1A0A0B4J241 112 aa13.15□□□□□ -0.3
NEDD4L-225ENST00000589054 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
NEDD4L-225ENST00000589054 CSDC2Q9Y534 153 aaKnown RBP13.15□□□□□ -0.3
NEDD4L-225ENST00000589054 C1orf196B1AJZ1 125 aa13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 COX7A2LO14548 114 aa13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 FCER1GP30273 86 aa13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 RPL23P62829 140 aaKnown RBP13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 RIGQ13278 110 aa13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 Q6ZRP5 223 aa13.14□□□□□ -0.31
NEDD4L-225ENST00000589054 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
NEDD4L-225ENST00000589054 FAM104BQ5XKR9 115 aa13.13□□□□□ -0.31
NEDD4L-225ENST00000589054 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-225ENST00000589054 MALP21145 153 aa13.11□□□□□ -0.31
NEDD4L-225ENST00000589054 RPL39P62891 51 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-225ENST00000589054 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-225ENST00000589054 TMEM241Q24JQ0 296 aa13.11□□□□□ -0.31
NEDD4L-225ENST00000589054 C9orf116Q5BN46 136 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-225ENST00000589054 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
NEDD4L-225ENST00000589054 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
NEDD4L-225ENST00000589054 SMIM27A0A1W2PRY6 76 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 APOMO95445 188 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 FAM74A3Q4VXF1 159 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 C2orf48Q96LS8 159 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
NEDD4L-225ENST00000589054 REG3GQ6UW15 175 aa13.08□□□□□ -0.32
NEDD4L-225ENST00000589054 PHF5AQ7RTV0 110 aaKnown RBP13.08□□□□□ -0.32
NEDD4L-225ENST00000589054 KIR2DL4Q99706 377 aa13.08□□□□□ -0.32
NEDD4L-225ENST00000589054 PSORS1C2Q9UIG4 136 aa13.08□□□□□ -0.32
NEDD4L-225ENST00000589054 LPAP08519 4548 aa13.08□□□□□ -0.32
NEDD4L-225ENST00000589054 TRBV24-1A0A075B6N3 115 aa13.07□□□□□ -0.32
NEDD4L-225ENST00000589054 ADIRFQ15847 76 aa13.07□□□□□ -0.32
NEDD4L-225ENST00000589054 KRTAP11-1Q8IUC1 163 aa13.07□□□□□ -0.32
NEDD4L-225ENST00000589054 PPP1R17O96001 155 aa13.06□□□□□ -0.32
NEDD4L-225ENST00000589054 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
NEDD4L-225ENST00000589054 C10orf25Q5T742 122 aa13.06□□□□□ -0.32
NEDD4L-225ENST00000589054 PPP1R2P9O14990 202 aa13.05□□□□□ -0.32
NEDD4L-225ENST00000589054 TNFRSF6BO95407 300 aa13.05□□□□□ -0.32
NEDD4L-225ENST00000589054 C20orf78Q9BR46 151 aa13.05□□□□□ -0.32
NEDD4L-225ENST00000589054 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
NEDD4L-225ENST00000589054 RPL32P62910 135 aaKnown RBP13.04□□□□□ -0.32
NEDD4L-225ENST00000589054 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
NEDD4L-225ENST00000589054 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
NEDD4L-225ENST00000589054 NPYP01303 97 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms