RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
CCDC130-209ENST00000588809 BTF3L4Q96K17 158 aa12.29□□□□□ -0.44
CCDC130-209ENST00000588809 PPP1R17O96001 155 aa12.28□□□□□ -0.44
CCDC130-209ENST00000588809 NRACQ8N912 160 aa12.28□□□□□ -0.44
CCDC130-209ENST00000588809 TMEM101Q96IK0 257 aa12.28□□□□□ -0.44
CCDC130-209ENST00000588809 GVQW2A0A096LPI5 108 aaPredicted RBP12.26□□□□□ -0.45
CCDC130-209ENST00000588809 C7orf77A4D0Y5 90 aa12.26□□□□□ -0.45
CCDC130-209ENST00000588809 FOXI1Q12951 378 aa12.26□□□□□ -0.45
CCDC130-209ENST00000588809 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
CCDC130-209ENST00000588809 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
CCDC130-209ENST00000588809 VCYO14598 125 aa12.25□□□□□ -0.45
CCDC130-209ENST00000588809 SUMO2P61956 95 aaKnown RBP12.25□□□□□ -0.45
CCDC130-209ENST00000588809 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
CCDC130-209ENST00000588809 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
CCDC130-209ENST00000588809 A0A1B0GW15 77 aa12.24□□□□□ -0.45
CCDC130-209ENST00000588809 J3QL48 77 aa12.24□□□□□ -0.45
CCDC130-209ENST00000588809 RPL37AP61513 92 aaKnown RBP12.24□□□□□ -0.45
CCDC130-209ENST00000588809 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
CCDC130-209ENST00000588809 PPP1R2P9O14990 202 aa12.23□□□□□ -0.45
CCDC130-209ENST00000588809 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
CCDC130-209ENST00000588809 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
CCDC130-209ENST00000588809 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
CCDC130-209ENST00000588809 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
CCDC130-209ENST00000588809 LINC00862A6NCI5 91 aa12.22□□□□□ -0.45
CCDC130-209ENST00000588809 CCL25O15444 150 aa12.22□□□□□ -0.45
CCDC130-209ENST00000588809 XCL1P47992 114 aa12.22□□□□□ -0.45
CCDC130-209ENST00000588809 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
CCDC130-209ENST00000588809 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
CCDC130-209ENST00000588809 FCER1GP30273 86 aa12.21□□□□□ -0.45
CCDC130-209ENST00000588809 CAMPP49913 170 aa12.21□□□□□ -0.45
CCDC130-209ENST00000588809 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
CCDC130-209ENST00000588809 A0A087WYN8 130 aa12.2□□□□□ -0.46
CCDC130-209ENST00000588809 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
CCDC130-209ENST00000588809 SS18Q15532 418 aa12.2□□□□□ -0.46
CCDC130-209ENST00000588809 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
CCDC130-209ENST00000588809 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
CCDC130-209ENST00000588809 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
CCDC130-209ENST00000588809 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
CCDC130-209ENST00000588809 PLAC8Q9NZF1 115 aa12.19□□□□□ -0.46
CCDC130-209ENST00000588809 UBE2D4Q9Y2X8 147 aa12.19□□□□□ -0.46
CCDC130-209ENST00000588809 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
CCDC130-209ENST00000588809 OXTP01178 125 aa12.18□□□□□ -0.46
CCDC130-209ENST00000588809 S100A8P05109 93 aa12.18□□□□□ -0.46
CCDC130-209ENST00000588809 HBBP68871 147 aa12.18□□□□□ -0.46
CCDC130-209ENST00000588809 COX6A2Q02221 97 aa12.18□□□□□ -0.46
CCDC130-209ENST00000588809 CKS2P33552 79 aa12.17□□□□□ -0.46
CCDC130-209ENST00000588809 HNRNPA3P51991 378 aaKnown RBP12.17□□□□□ -0.46
CCDC130-209ENST00000588809 PRSS3P2Q8NHM4 247 aa12.17□□□□□ -0.46
CCDC130-209ENST00000588809 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
CCDC130-209ENST00000588809 C1orf196B1AJZ1 125 aa12.16□□□□□ -0.46
CCDC130-209ENST00000588809 F8W036 122 aa12.16□□□□□ -0.46
CCDC130-209ENST00000588809 TCAPO15273 167 aa12.16□□□□□ -0.46
CCDC130-209ENST00000588809 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
CCDC130-209ENST00000588809 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
CCDC130-209ENST00000588809 D6R8Y8 96 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 PHOX2AO14813 284 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
CCDC130-209ENST00000588809 PPBPP02775 128 aa12.13□□□□□ -0.47
CCDC130-209ENST00000588809 A0A096LNI7 61 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 NPYP01303 97 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 Q6ZUT4 128 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 CARD19Q96LW7 228 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 PKIGQ9Y2B9 76 aa12.12□□□□□ -0.47
CCDC130-209ENST00000588809 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
CCDC130-209ENST00000588809 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
CCDC130-209ENST00000588809 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
CCDC130-209ENST00000588809 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
CCDC130-209ENST00000588809 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
CCDC130-209ENST00000588809 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
CCDC130-209ENST00000588809 COX7A2LO14548 114 aa12.1□□□□□ -0.47
CCDC130-209ENST00000588809 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
CCDC130-209ENST00000588809 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
CCDC130-209ENST00000588809 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
CCDC130-209ENST00000588809 SYCNQ0VAF6 134 aa12.09□□□□□ -0.47
CCDC130-209ENST00000588809 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
CCDC130-209ENST00000588809 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
CCDC130-209ENST00000588809 MALP21145 153 aa12.08□□□□□ -0.48
CCDC130-209ENST00000588809 STPG4Q8N801 248 aa12.08□□□□□ -0.48
CCDC130-209ENST00000588809 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
CCDC130-209ENST00000588809 RAB14P61106 215 aa12.07□□□□□ -0.48
CCDC130-209ENST00000588809 MRPS36P82909 103 aaKnown RBP12.07□□□□□ -0.48
CCDC130-209ENST00000588809 Q6ZRU5 148 aa12.07□□□□□ -0.48
CCDC130-209ENST00000588809 ANAPC16Q96DE5 110 aa12.07□□□□□ -0.48
CCDC130-209ENST00000588809 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
CCDC130-209ENST00000588809 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
CCDC130-209ENST00000588809 TMEM136Q6ZRR5 245 aa12.06□□□□□ -0.48
CCDC130-209ENST00000588809 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
CCDC130-209ENST00000588809 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
CCDC130-209ENST00000588809 C2orf48Q96LS8 159 aa12.05□□□□□ -0.48
CCDC130-209ENST00000588809 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
CCDC130-209ENST00000588809 APOMO95445 188 aa12.04□□□□□ -0.48
CCDC130-209ENST00000588809 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
CCDC130-209ENST00000588809 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
CCDC130-209ENST00000588809 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
CCDC130-209ENST00000588809 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
CCDC130-209ENST00000588809 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms