RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 LINC00474Q9P2X8 69 aa11.31□□□□□ -0.6
GFAP-213ENST00000588640 CT83Q5H943 113 aa11.3□□□□□ -0.6
GFAP-213ENST00000588640 ALKAL2Q6UX46 152 aa11.3□□□□□ -0.6
GFAP-213ENST00000588640 ESDP10768 282 aa11.29□□□□□ -0.6
GFAP-213ENST00000588640 SS18Q15532 418 aa11.29□□□□□ -0.6
GFAP-213ENST00000588640 C7orf77A4D0Y5 90 aa11.28□□□□□ -0.6
GFAP-213ENST00000588640 HIGD1CA8MV81 97 aa11.28□□□□□ -0.6
GFAP-213ENST00000588640 LINC01600Q96MT4 127 aa11.28□□□□□ -0.6
GFAP-213ENST00000588640 A0A1B0GUT8 65 aa11.27□□□□□ -0.61
GFAP-213ENST00000588640 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
GFAP-213ENST00000588640 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
GFAP-213ENST00000588640 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
GFAP-213ENST00000588640 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 ODF1Q14990 250 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 MRPL52Q86TS9 123 aaKnown RBP11.26□□□□□ -0.61
GFAP-213ENST00000588640 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 CDC42SE2Q9NRR3 84 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 LRP2P98164 4655 aa11.26□□□□□ -0.61
GFAP-213ENST00000588640 TRBV27A0A0K0K1C4 114 aa11.25□□□□□ -0.61
GFAP-213ENST00000588640 CAMPP49913 170 aa11.25□□□□□ -0.61
GFAP-213ENST00000588640 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
GFAP-213ENST00000588640 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
GFAP-213ENST00000588640 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
GFAP-213ENST00000588640 REG3GQ6UW15 175 aa11.24□□□□□ -0.61
GFAP-213ENST00000588640 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
GFAP-213ENST00000588640 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
GFAP-213ENST00000588640 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 RAB4AP20338 218 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 MALP21145 153 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 FCER1GP30273 86 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
GFAP-213ENST00000588640 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 ISOC2Q96AB3 205 aa11.23□□□□□ -0.61
GFAP-213ENST00000588640 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
GFAP-213ENST00000588640 RNF213Q63HN8 5207 aa11.22□□□□□ -0.61
GFAP-213ENST00000588640 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
GFAP-213ENST00000588640 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
GFAP-213ENST00000588640 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
GFAP-213ENST00000588640 Q6ZRP5 223 aa11.22□□□□□ -0.61
GFAP-213ENST00000588640 AKAP14Q86UN6 197 aa11.22□□□□□ -0.61
GFAP-213ENST00000588640 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
GFAP-213ENST00000588640 LOC107984640A0A0U1RRK4 108 aa11.21□□□□□ -0.61
GFAP-213ENST00000588640 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
GFAP-213ENST00000588640 COX7A2LO14548 114 aa11.21□□□□□ -0.61
GFAP-213ENST00000588640 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
GFAP-213ENST00000588640 C1orf196B1AJZ1 125 aa11.2□□□□□ -0.62
GFAP-213ENST00000588640 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
GFAP-213ENST00000588640 VCYO14598 125 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
GFAP-213ENST00000588640 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 RIGQ13278 110 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 CAMK2N2Q96S95 79 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
GFAP-213ENST00000588640 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
GFAP-213ENST00000588640 TRAV13-1A0A0B4J241 112 aa11.18□□□□□ -0.62
GFAP-213ENST00000588640 Q6ZUT4 128 aa11.18□□□□□ -0.62
GFAP-213ENST00000588640 NRACQ8N912 160 aa11.18□□□□□ -0.62
GFAP-213ENST00000588640 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
GFAP-213ENST00000588640 APOMO95445 188 aa11.17□□□□□ -0.62
GFAP-213ENST00000588640 PPP1R17O96001 155 aa11.17□□□□□ -0.62
GFAP-213ENST00000588640 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
GFAP-213ENST00000588640 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
GFAP-213ENST00000588640 V9GYV3 84 aa11.17□□□□□ -0.62
GFAP-213ENST00000588640 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
GFAP-213ENST00000588640 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.62
GFAP-213ENST00000588640 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
GFAP-213ENST00000588640 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
GFAP-213ENST00000588640 NAT8BQ9UHF3 227 aa11.15□□□□□ -0.62
GFAP-213ENST00000588640 KRTAP10-8P60410 259 aa11.14□□□□□ -0.63
GFAP-213ENST00000588640 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
GFAP-213ENST00000588640 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
GFAP-213ENST00000588640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
GFAP-213ENST00000588640 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
GFAP-213ENST00000588640 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
GFAP-213ENST00000588640 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
GFAP-213ENST00000588640 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
GFAP-213ENST00000588640 MT-ND6P03923 174 aa11.12□□□□□ -0.63
GFAP-213ENST00000588640 ADIRFQ15847 76 aa11.12□□□□□ -0.63
GFAP-213ENST00000588640 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
GFAP-213ENST00000588640 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
GFAP-213ENST00000588640 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
GFAP-213ENST00000588640 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
GFAP-213ENST00000588640 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
GFAP-213ENST00000588640 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
GFAP-213ENST00000588640 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
GFAP-213ENST00000588640 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
GFAP-213ENST00000588640 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
GFAP-213ENST00000588640 CKS2P33552 79 aa11.09□□□□□ -0.63
GFAP-213ENST00000588640 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
GFAP-213ENST00000588640 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
GFAP-213ENST00000588640 PHF5AQ7RTV0 110 aaKnown RBP11.09□□□□□ -0.63
GFAP-213ENST00000588640 C20orf78Q9BR46 151 aa11.09□□□□□ -0.63
GFAP-213ENST00000588640 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
GFAP-213ENST00000588640 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
GFAP-213ENST00000588640 LINC00862A6NCI5 91 aa11.07□□□□□ -0.64
GFAP-213ENST00000588640 TCAPO15273 167 aa11.07□□□□□ -0.64
GFAP-213ENST00000588640 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
GFAP-213ENST00000588640 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms