RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 XKRY2A2RUG3 117 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 FAM231BA6NCW3 169 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 FGF6P10767 208 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 RPS10P46783 165 aaKnown RBP4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 MAJINQ3KP22 176 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 AMMECR1LQ6DCA0 310 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 WDR73Q6P4I2 378 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 RNASEKQ6P5S7 137 aaKnown RBP4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 Q6ZRU5 148 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
GPATCH8-206ENST00000588554 A0A096LNI7 61 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 SDHAF1A6NFY7 115 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 XCL1P47992 114 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 STPG4Q8N801 248 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 SMIM12Q96EX1 92 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 CNFNQ9BYD5 112 aa4.72□□□□□ -1.65
GPATCH8-206ENST00000588554 TEX46H3BTG2 121 aa4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 NDUFS6O75380 124 aaKnown RBP4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 TSHBP01222 138 aa4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 CEBPGP53567 150 aa4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 BIN3Q9NQY0 253 aa4.71□□□□□ -1.66
GPATCH8-206ENST00000588554 GVQW2A0A096LPI5 108 aaPredicted RBP4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 LINC00959A0A1B0GUT2 108 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 CCL25O15444 150 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 GATCO43716 136 aaKnown RBP4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 APCSP02743 223 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 PMCHP20382 165 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 PRR3P79522 188 aaKnown RBP4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 CFAP161Q6P656 301 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 ALKAL2Q6UX46 152 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 SLC51BQ86UW2 128 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 RNF185Q96GF1 192 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 TMEM242Q9NWH2 141 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
GPATCH8-206ENST00000588554 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 SMKR1H3BMG3 65 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 I3L3M4 83 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 NCR2O95944 276 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 ESDP10768 282 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 RNASE13Q5GAN3 156 aaKnown RBP4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 TCTE3Q8IZS6 198 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 OR5A1Q8NGJ0 315 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 LINC01600Q96MT4 127 aa4.69□□□□□ -1.66
GPATCH8-206ENST00000588554 TRBV6-5A0A0K0K1A5 114 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 H7C423 109 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 RAB4AP20338 218 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 SMIM15Q7Z3B0 74 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 AMN1Q8IY45 258 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
GPATCH8-206ENST00000588554 hCG_2014768A0A024R1R8 64 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 A8MWL6 223 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 TRIAP1O43715 76 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 MALP21145 153 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 POLR2KP53803 58 aaKnown RBP4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 SRSF9Q13242 221 aaKnown RBP eCLIP4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 TEX261Q6UWH6 196 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 TMEM101Q96IK0 257 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
GPATCH8-206ENST00000588554 IGLV4-69A0A075B6H9 119 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 A0A0J9YXV3 536 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 A0A1W2PNN7 141 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 HIGD1CA8MV81 97 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 TMEM250H0YL14 139 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 ZNF25P17030 456 aaPredicted RBP4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 TAGLN2P37802 199 aaKnown RBP4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 SYCNQ0VAF6 134 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 SS18Q15532 418 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 LINC01551Q86U37 167 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 CARD19Q96LW7 228 aa4.66□□□□□ -1.66
GPATCH8-206ENST00000588554 A0A1B0GUT8 65 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 CD164L2Q6UWJ8 174 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 C5orf38Q86SI9 138 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 MRPL52Q86TS9 123 aaKnown RBP4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 MRAP2Q96G30 205 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 EIF5A2Q9GZV4 153 aaKnown RBP4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.67
GPATCH8-206ENST00000588554 TRAV13-1A0A0B4J241 112 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 TRBV27A0A0K0K1C4 114 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 ZNF727A8MUV8 499 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 VCYO14598 125 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 SRP19P09132 144 aaKnown RBP4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 CAMPP49913 170 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 SPINK6Q6UWN8 80 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 NRACQ8N912 160 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 FAM104AQ969W3 186 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 BORCS7Q96B45 105 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 SMIM7Q9BQ49 75 aa4.64□□□□□ -1.67
GPATCH8-206ENST00000588554 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms