RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 HBBP68871 147 aa13.53□□□□□ -0.24
NCLN-204ENST00000588428 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
NCLN-204ENST00000588428 FLG2Q5D862 2391 aaPredicted RBP13.53□□□□□ -0.24
NCLN-204ENST00000588428 IGKV3OR2-268A0A0C4DH90 116 aa13.52□□□□□ -0.25
NCLN-204ENST00000588428 C15orf56Q8N910 161 aa13.52□□□□□ -0.25
NCLN-204ENST00000588428 C20orf78Q9BR46 151 aa13.52□□□□□ -0.25
NCLN-204ENST00000588428 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.25
NCLN-204ENST00000588428 PNRC1Q12796 327 aaPredicted RBP13.51□□□□□ -0.25
NCLN-204ENST00000588428 SDIM1Q6ZPB5 146 aa13.51□□□□□ -0.25
NCLN-204ENST00000588428 ATP5L2Q7Z4Y8 100 aa13.51□□□□□ -0.25
NCLN-204ENST00000588428 KIR2DL4Q99706 377 aa13.51□□□□□ -0.25
NCLN-204ENST00000588428 CDC42SE2Q9NRR3 84 aa13.51□□□□□ -0.25
NCLN-204ENST00000588428 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
NCLN-204ENST00000588428 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
NCLN-204ENST00000588428 F8W036 122 aa13.5□□□□□ -0.25
NCLN-204ENST00000588428 FCER1GP30273 86 aa13.5□□□□□ -0.25
NCLN-204ENST00000588428 LINC00959A0A1B0GUT2 108 aa13.49□□□□□ -0.25
NCLN-204ENST00000588428 SLPIP03973 132 aa13.49□□□□□ -0.25
NCLN-204ENST00000588428 CKS2P33552 79 aa13.49□□□□□ -0.25
NCLN-204ENST00000588428 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
NCLN-204ENST00000588428 FOXI1Q12951 378 aa13.49□□□□□ -0.25
NCLN-204ENST00000588428 MRPL54Q6P161 138 aaKnown RBP13.49□□□□□ -0.25
NCLN-204ENST00000588428 PHOX2AO14813 284 aa13.48□□□□□ -0.25
NCLN-204ENST00000588428 TCAPO15273 167 aa13.48□□□□□ -0.25
NCLN-204ENST00000588428 CIRBPQ14011 172 aaKnown RBP13.48□□□□□ -0.25
NCLN-204ENST00000588428 CLLU1Q5K131 121 aa13.48□□□□□ -0.25
NCLN-204ENST00000588428 GVQW2A0A096LPI5 108 aaPredicted RBP13.47□□□□□ -0.25
NCLN-204ENST00000588428 PPBPP02775 128 aa13.47□□□□□ -0.25
NCLN-204ENST00000588428 ZNF664Q8N3J9 261 aa13.47□□□□□ -0.25
NCLN-204ENST00000588428 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.25
NCLN-204ENST00000588428 TNFRSF6BO95407 300 aa13.46□□□□□ -0.25
NCLN-204ENST00000588428 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.25
NCLN-204ENST00000588428 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
NCLN-204ENST00000588428 UBE2D4Q9Y2X8 147 aa13.46□□□□□ -0.25
NCLN-204ENST00000588428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.46□□□□□ -0.25
NCLN-204ENST00000588428 DMBT1Q9UGM3 2413 aaPredicted RBP13.45□□□□□ -0.26
NCLN-204ENST00000588428 D6R8Y8 96 aa13.45□□□□□ -0.26
NCLN-204ENST00000588428 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
NCLN-204ENST00000588428 SMIM2Q9BVW6 85 aa13.45□□□□□ -0.26
NCLN-204ENST00000588428 MYCBP2O75592 4640 aa13.44□□□□□ -0.26
NCLN-204ENST00000588428 CCL25O15444 150 aa13.44□□□□□ -0.26
NCLN-204ENST00000588428 MT-ND4LP03901 98 aa13.44□□□□□ -0.26
NCLN-204ENST00000588428 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
NCLN-204ENST00000588428 SS18Q15532 418 aa13.44□□□□□ -0.26
NCLN-204ENST00000588428 XCL1P47992 114 aa13.43□□□□□ -0.26
NCLN-204ENST00000588428 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
NCLN-204ENST00000588428 PANO1I0J062 215 aa13.42□□□□□ -0.26
NCLN-204ENST00000588428 NPYP01303 97 aa13.42□□□□□ -0.26
NCLN-204ENST00000588428 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
NCLN-204ENST00000588428 IGHV1-58A0A0C4DH39 117 aa13.41□□□□□ -0.26
NCLN-204ENST00000588428 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
NCLN-204ENST00000588428 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.26
NCLN-204ENST00000588428 UQCC3Q6UW78 93 aa13.39□□□□□ -0.27
NCLN-204ENST00000588428 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
NCLN-204ENST00000588428 PRSS47A8MTI9 375 aa13.38□□□□□ -0.27
NCLN-204ENST00000588428 IFITM2Q01629 132 aa13.38□□□□□ -0.27
NCLN-204ENST00000588428 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
NCLN-204ENST00000588428 SPACA4Q8TDM5 124 aa13.38□□□□□ -0.27
NCLN-204ENST00000588428 SPANXA1Q9NS26 97 aa13.38□□□□□ -0.27
NCLN-204ENST00000588428 Q6ZUT4 128 aa13.37□□□□□ -0.27
NCLN-204ENST00000588428 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
NCLN-204ENST00000588428 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
NCLN-204ENST00000588428 MRPS36P82909 103 aaKnown RBP13.35□□□□□ -0.27
NCLN-204ENST00000588428 FAM104AQ969W3 186 aa13.35□□□□□ -0.27
NCLN-204ENST00000588428 IMMP2LQ96T52 175 aa13.35□□□□□ -0.27
NCLN-204ENST00000588428 PKIGQ9Y2B9 76 aa13.35□□□□□ -0.27
NCLN-204ENST00000588428 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
NCLN-204ENST00000588428 ADCYAP1P18509 176 aa13.34□□□□□ -0.27
NCLN-204ENST00000588428 RPL37AP61513 92 aaKnown RBP13.34□□□□□ -0.27
NCLN-204ENST00000588428 COX6A2Q02221 97 aa13.34□□□□□ -0.27
NCLN-204ENST00000588428 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
NCLN-204ENST00000588428 A0A087WYN8 130 aa13.33□□□□□ -0.28
NCLN-204ENST00000588428 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
NCLN-204ENST00000588428 TMEM218A2RU14 115 aa13.33□□□□□ -0.28
NCLN-204ENST00000588428 COX7A2LO14548 114 aa13.33□□□□□ -0.28
NCLN-204ENST00000588428 PLAC8Q9NZF1 115 aa13.33□□□□□ -0.28
NCLN-204ENST00000588428 KRTAP29-1A8MX34 341 aaPredicted RBP13.32□□□□□ -0.28
NCLN-204ENST00000588428 PRSS3P2Q8NHM4 247 aa13.32□□□□□ -0.28
NCLN-204ENST00000588428 ZNF561-AS1K7EIQ3 104 aa13.31□□□□□ -0.28
NCLN-204ENST00000588428 RAB5AP20339 215 aa13.31□□□□□ -0.28
NCLN-204ENST00000588428 CARD19Q96LW7 228 aa13.31□□□□□ -0.28
NCLN-204ENST00000588428 CTDSP1Q9GZU7 261 aa13.31□□□□□ -0.28
NCLN-204ENST00000588428 MALP21145 153 aa13.3□□□□□ -0.28
NCLN-204ENST00000588428 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
NCLN-204ENST00000588428 PYGO1Q9Y3Y4 419 aa13.3□□□□□ -0.28
NCLN-204ENST00000588428 HERC1Q15751 4861 aa13.29□□□□□ -0.28
NCLN-204ENST00000588428 PKHD1L1Q86WI1 4243 aa13.29□□□□□ -0.28
NCLN-204ENST00000588428 TRAV9-1A0A075B6T8 112 aa13.29□□□□□ -0.28
NCLN-204ENST00000588428 SYCNQ0VAF6 134 aa13.29□□□□□ -0.28
NCLN-204ENST00000588428 SEC11CQ9BY50 192 aa13.29□□□□□ -0.28
NCLN-204ENST00000588428 IFI27P40305 119 aaPredicted RBP13.28□□□□□ -0.28
NCLN-204ENST00000588428 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
NCLN-204ENST00000588428 DPH3Q96FX2 82 aa13.28□□□□□ -0.28
NCLN-204ENST00000588428 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
NCLN-204ENST00000588428 K7EMI3 77 aa13.27□□□□□ -0.29
NCLN-204ENST00000588428 APOMO95445 188 aa13.27□□□□□ -0.29
NCLN-204ENST00000588428 Q8N8P6 123 aa13.27□□□□□ -0.29
NCLN-204ENST00000588428 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
NCLN-204ENST00000588428 IGLV4-69A0A075B6H9 119 aa13.26□□□□□ -0.29
NCLN-204ENST00000588428 A0A096LNI7 61 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms