RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 BCL2P10415 239 aa8.38□□□□□ -1.07
CLPTM1-208ENST00000588274 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
CLPTM1-208ENST00000588274 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
CLPTM1-208ENST00000588274 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
CLPTM1-208ENST00000588274 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
CLPTM1-208ENST00000588274 KANTRA0A1W2PQU2 76 aa8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 I3L3M4 83 aa8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
CLPTM1-208ENST00000588274 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
CLPTM1-208ENST00000588274 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
CLPTM1-208ENST00000588274 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
CLPTM1-208ENST00000588274 TRBV27A0A0K0K1C4 114 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 A0A1B0GVG6 124 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 APOMO95445 188 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 OCC1Q8TAD7 63 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 BTF3L4Q96K17 158 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
CLPTM1-208ENST00000588274 SS18Q15532 418 aa8.33□□□□□ -1.08
CLPTM1-208ENST00000588274 hCG_2014768A0A024R1R8 64 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 MT-ND6P03923 174 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 PMCHP20382 165 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 C1orf137Q5JT78 98 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 EIF5AL1Q6IS14 154 aaKnown RBP8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
CLPTM1-208ENST00000588274 C7orf77A4D0Y5 90 aa8.31□□□□□ -1.08
CLPTM1-208ENST00000588274 ISOC2Q96AB3 205 aa8.31□□□□□ -1.08
CLPTM1-208ENST00000588274 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
CLPTM1-208ENST00000588274 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
CLPTM1-208ENST00000588274 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
CLPTM1-208ENST00000588274 H0Y9J4 135 aa8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 COX7A2LO14548 114 aa8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 FAM231DQ6ZW35 169 aa8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 FAM104AQ969W3 186 aa8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 CSDC2Q9Y534 153 aaKnown RBP8.3□□□□□ -1.08
CLPTM1-208ENST00000588274 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
CLPTM1-208ENST00000588274 RAB4AP20338 218 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 CT83Q5H943 113 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 Q6ZUT4 128 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
CLPTM1-208ENST00000588274 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
CLPTM1-208ENST00000588274 MALP21145 153 aa8.27□□□□□ -1.09
CLPTM1-208ENST00000588274 SPAG11BQ08648 103 aa8.27□□□□□ -1.09
CLPTM1-208ENST00000588274 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
CLPTM1-208ENST00000588274 NRACQ8N912 160 aa8.27□□□□□ -1.09
CLPTM1-208ENST00000588274 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 TRAV13-1A0A0B4J241 112 aa8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 GATCO43716 136 aaKnown RBP8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
CLPTM1-208ENST00000588274 A8MWL6 223 aa8.25□□□□□ -1.09
CLPTM1-208ENST00000588274 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
CLPTM1-208ENST00000588274 OR10D4PQ8NGN7 298 aa8.25□□□□□ -1.09
CLPTM1-208ENST00000588274 HIGD1CA8MV81 97 aa8.24□□□□□ -1.09
CLPTM1-208ENST00000588274 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
CLPTM1-208ENST00000588274 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
CLPTM1-208ENST00000588274 TAGLN2P37802 199 aaKnown RBP8.24□□□□□ -1.09
CLPTM1-208ENST00000588274 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
CLPTM1-208ENST00000588274 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
CLPTM1-208ENST00000588274 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
CLPTM1-208ENST00000588274 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
CLPTM1-208ENST00000588274 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
CLPTM1-208ENST00000588274 A0A087WZ39 114 aa8.22□□□□□ -1.09
CLPTM1-208ENST00000588274 VCYO14598 125 aa8.22□□□□□ -1.09
CLPTM1-208ENST00000588274 SUMO2P61956 95 aaKnown RBP8.22□□□□□ -1.09
CLPTM1-208ENST00000588274 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
CLPTM1-208ENST00000588274 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
CLPTM1-208ENST00000588274 ORAOV1Q8WV07 137 aa8.21□□□□□ -1.1
CLPTM1-208ENST00000588274 SMDT1Q9H4I9 107 aa8.21□□□□□ -1.1
CLPTM1-208ENST00000588274 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
CLPTM1-208ENST00000588274 FCER1GP30273 86 aa8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 PRR4Q16378 134 aa8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 SLC51BQ86UW2 128 aa8.2□□□□□ -1.1
CLPTM1-208ENST00000588274 F8WDY8 70 aa8.19□□□□□ -1.1
CLPTM1-208ENST00000588274 NDUFA1O15239 70 aa8.19□□□□□ -1.1
CLPTM1-208ENST00000588274 IMMP2LQ96T52 175 aa8.19□□□□□ -1.1
CLPTM1-208ENST00000588274 M0QXV9 152 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms