RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 CEBPGP53567 150 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 STPG4Q8N801 248 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 FAM210AQ96ND0 272 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
TRAPPC6A-204ENST00000588062 TNXBP22105 4242 aa9.72□□□□□ -0.85
TRAPPC6A-204ENST00000588062 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
TRAPPC6A-204ENST00000588062 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
TRAPPC6A-204ENST00000588062 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
TRAPPC6A-204ENST00000588062 OSTCQ9NRP0 149 aa9.72□□□□□ -0.85
TRAPPC6A-204ENST00000588062 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
TRAPPC6A-204ENST00000588062 PRR3P79522 188 aaKnown RBP9.71□□□□□ -0.86
TRAPPC6A-204ENST00000588062 AMN1Q8IY45 258 aa9.71□□□□□ -0.86
TRAPPC6A-204ENST00000588062 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 SRP19P09132 144 aaKnown RBP9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 SS18Q15532 418 aa9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 CD164L2Q6UWJ8 174 aa9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
TRAPPC6A-204ENST00000588062 C7orf77A4D0Y5 90 aa9.69□□□□□ -0.86
TRAPPC6A-204ENST00000588062 ZNF727A8MUV8 499 aa9.69□□□□□ -0.86
TRAPPC6A-204ENST00000588062 V9GYV3 84 aa9.69□□□□□ -0.86
TRAPPC6A-204ENST00000588062 SMKR1H3BMG3 65 aa9.68□□□□□ -0.86
TRAPPC6A-204ENST00000588062 NUP35Q8NFH5 326 aa9.68□□□□□ -0.86
TRAPPC6A-204ENST00000588062 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
TRAPPC6A-204ENST00000588062 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
TRAPPC6A-204ENST00000588062 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
TRAPPC6A-204ENST00000588062 VCYO14598 125 aa9.67□□□□□ -0.86
TRAPPC6A-204ENST00000588062 SYCNQ0VAF6 134 aa9.67□□□□□ -0.86
TRAPPC6A-204ENST00000588062 NRACQ8N912 160 aa9.67□□□□□ -0.86
TRAPPC6A-204ENST00000588062 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
TRAPPC6A-204ENST00000588062 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
TRAPPC6A-204ENST00000588062 RIGQ13278 110 aa9.66□□□□□ -0.86
TRAPPC6A-204ENST00000588062 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
TRAPPC6A-204ENST00000588062 SUMO2P61956 95 aaKnown RBP9.65□□□□□ -0.86
TRAPPC6A-204ENST00000588062 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
TRAPPC6A-204ENST00000588062 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
TRAPPC6A-204ENST00000588062 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
TRAPPC6A-204ENST00000588062 LRP2P98164 4655 aa9.65□□□□□ -0.87
TRAPPC6A-204ENST00000588062 PPP1R17O96001 155 aa9.64□□□□□ -0.87
TRAPPC6A-204ENST00000588062 CAMPP49913 170 aa9.64□□□□□ -0.87
TRAPPC6A-204ENST00000588062 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAPPC6A-204ENST00000588062 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 FCER1GP30273 86 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 KRTAP10-8P60410 259 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 RPL23P62829 140 aaKnown RBP9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 ODF1Q14990 250 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 TMEM241Q24JQ0 296 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 MRPL51Q4U2R6 128 aaKnown RBP9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
TRAPPC6A-204ENST00000588062 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
TRAPPC6A-204ENST00000588062 C9JQL5 133 aa9.62□□□□□ -0.87
TRAPPC6A-204ENST00000588062 COX7A2LO14548 114 aa9.62□□□□□ -0.87
TRAPPC6A-204ENST00000588062 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
TRAPPC6A-204ENST00000588062 NAT8BQ9UHF3 227 aa9.62□□□□□ -0.87
TRAPPC6A-204ENST00000588062 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
TRAPPC6A-204ENST00000588062 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
TRAPPC6A-204ENST00000588062 Q6ZRP5 223 aa9.61□□□□□ -0.87
TRAPPC6A-204ENST00000588062 TIMM21Q9BVV7 248 aa9.61□□□□□ -0.87
TRAPPC6A-204ENST00000588062 TRBV24-1A0A075B6N3 115 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 SMIM27A0A1W2PRY6 76 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 MALP21145 153 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 GAGE2BQ13066 116 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 Q6ZUT4 128 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
TRAPPC6A-204ENST00000588062 LINC00862A6NCI5 91 aa9.59□□□□□ -0.87
TRAPPC6A-204ENST00000588062 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
TRAPPC6A-204ENST00000588062 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
TRAPPC6A-204ENST00000588062 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
TRAPPC6A-204ENST00000588062 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
TRAPPC6A-204ENST00000588062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC6A-204ENST00000588062 ADIRFQ15847 76 aa9.58□□□□□ -0.88
TRAPPC6A-204ENST00000588062 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
TRAPPC6A-204ENST00000588062 NAT8Q9UHE5 227 aa9.58□□□□□ -0.88
TRAPPC6A-204ENST00000588062 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
TRAPPC6A-204ENST00000588062 APOMO95445 188 aa9.57□□□□□ -0.88
TRAPPC6A-204ENST00000588062 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
TRAPPC6A-204ENST00000588062 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
TRAPPC6A-204ENST00000588062 TMEM18Q96B42 140 aa9.57□□□□□ -0.88
TRAPPC6A-204ENST00000588062 A0A1B0GW15 77 aa9.56□□□□□ -0.88
TRAPPC6A-204ENST00000588062 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
TRAPPC6A-204ENST00000588062 CKS2P33552 79 aa9.56□□□□□ -0.88
TRAPPC6A-204ENST00000588062 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC6A-204ENST00000588062 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
TRAPPC6A-204ENST00000588062 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
TRAPPC6A-204ENST00000588062 RNF151Q2KHN1 245 aa9.55□□□□□ -0.88
TRAPPC6A-204ENST00000588062 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC6A-204ENST00000588062 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms