RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TMEM242Q9NWH2 141 aa15.14■□□□□ 0.01
LSM7-204ENST00000587502 VCYO14598 125 aa15.13■□□□□ 0.01
LSM7-204ENST00000587502 D6R8Y8 96 aa15.12■□□□□ 0.01
LSM7-204ENST00000587502 C9orf163Q8N9P6 203 aa15.12■□□□□ 0.01
LSM7-204ENST00000587502 C20orf78Q9BR46 151 aa15.12■□□□□ 0.01
LSM7-204ENST00000587502 TNFRSF6BO95407 300 aa15.11■□□□□ 0.01
LSM7-204ENST00000587502 PPBPP02775 128 aa15.11■□□□□ 0.01
LSM7-204ENST00000587502 ESDP10768 282 aa15.11■□□□□ 0.01
LSM7-204ENST00000587502 ZNF25P17030 456 aaPredicted RBP15.11■□□□□ 0.01
LSM7-204ENST00000587502 RNASEKQ6P5S7 137 aaKnown RBP15.11■□□□□ 0.01
LSM7-204ENST00000587502 CIRBP-AS1Q8TBR5 109 aa15.11■□□□□ 0.01
LSM7-204ENST00000587502 HERC1Q15751 4861 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.1■□□□□ 0.01
LSM7-204ENST00000587502 TRAV9-1A0A075B6T8 112 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 hDV102S1A0JD36 115 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 IGKV2-29A2NJV5 120 aaPredicted RBP15.1■□□□□ 0.01
LSM7-204ENST00000587502 RHEBQ15382 184 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 CFAP161Q6P656 301 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 AP5S1Q9NUS5 200 aa15.1■□□□□ 0.01
LSM7-204ENST00000587502 NPYP01303 97 aa15.09■□□□□ 0.01
LSM7-204ENST00000587502 FGF6P10767 208 aa15.09■□□□□ 0.01
LSM7-204ENST00000587502 CNBPP62633 177 aaKnown RBP15.09■□□□□ 0.01
LSM7-204ENST00000587502 RPL32P62910 135 aaKnown RBP15.09■□□□□ 0.01
LSM7-204ENST00000587502 TMEM136Q6ZRR5 245 aa15.09■□□□□ 0.01
LSM7-204ENST00000587502 TMEM101Q96IK0 257 aa15.09■□□□□ 0.01
LSM7-204ENST00000587502 PHOX2AO14813 284 aa15.08■□□□□ 0
LSM7-204ENST00000587502 ORMDL3Q8N138 153 aa15.08■□□□□ 0
LSM7-204ENST00000587502 RPS10P5Q9NQ39 176 aa15.08■□□□□ 0
LSM7-204ENST00000587502 FLG2Q5D862 2391 aaPredicted RBP15.07■□□□□ 0
LSM7-204ENST00000587502 DMBT1Q9UGM3 2413 aaPredicted RBP15.07■□□□□ 0
LSM7-204ENST00000587502 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.07■□□□□ 0
LSM7-204ENST00000587502 APOC3P02656 99 aa15.07■□□□□ 0
LSM7-204ENST00000587502 IGKV3OR2-268A0A0C4DH90 116 aa15.06■□□□□ 0
LSM7-204ENST00000587502 S100PP25815 95 aa15.06■□□□□ 0
LSM7-204ENST00000587502 PRELID3AQ96N28 172 aa15.06■□□□□ 0
LSM7-204ENST00000587502 KIR2DL4Q99706 377 aa15.06■□□□□ 0
LSM7-204ENST00000587502 GAGE12HA6NDE8 117 aa15.05■□□□□ -0
LSM7-204ENST00000587502 FCER1GP30273 86 aa15.05■□□□□ -0
LSM7-204ENST00000587502 NDUFA5Q16718 116 aa15.05■□□□□ -0
LSM7-204ENST00000587502 MYCBP2O75592 4640 aa15.05■□□□□ -0
LSM7-204ENST00000587502 OR5A1Q8NGJ0 315 aa15.04■□□□□ -0
LSM7-204ENST00000587502 SMIM2Q9BVW6 85 aa15.04■□□□□ -0
LSM7-204ENST00000587502 SDIM1Q6ZPB5 146 aa15.03■□□□□ -0
LSM7-204ENST00000587502 SVBPQ8N300 66 aa15.03■□□□□ -0
LSM7-204ENST00000587502 CHCHD10Q8WYQ3 142 aaPredicted RBP15.03■□□□□ -0
LSM7-204ENST00000587502 IGHV3-64A0A075B6Q5 118 aa15.02■□□□□ -0
LSM7-204ENST00000587502 PRSS47A8MTI9 375 aa15.02■□□□□ -0
LSM7-204ENST00000587502 LAMTOR2Q9Y2Q5 125 aa15.02■□□□□ -0
LSM7-204ENST00000587502 SNAPINO95295 136 aa15.01□□□□□ -0.01
LSM7-204ENST00000587502 SMAGPQ0VAQ4 97 aa15.01□□□□□ -0.01
LSM7-204ENST00000587502 MRPL52Q86TS9 123 aaKnown RBP15.01□□□□□ -0.01
LSM7-204ENST00000587502 SLC7A5P1Q8MH63 180 aa15□□□□□ -0.01
LSM7-204ENST00000587502 TCAPO15273 167 aa14.99□□□□□ -0.01
LSM7-204ENST00000587502 C15orf56Q8N910 161 aa14.99□□□□□ -0.01
LSM7-204ENST00000587502 GNB1LQ9BYB4 327 aa14.98□□□□□ -0.01
LSM7-204ENST00000587502 LINC00959A0A1B0GUT2 108 aa14.97□□□□□ -0.01
LSM7-204ENST00000587502 SLPIP03973 132 aa14.97□□□□□ -0.01
LSM7-204ENST00000587502 SS18Q15532 418 aa14.97□□□□□ -0.01
LSM7-204ENST00000587502 CDC42SE2Q9NRR3 84 aa14.97□□□□□ -0.01
LSM7-204ENST00000587502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.97□□□□□ -0.01
LSM7-204ENST00000587502 FOXI1Q12951 378 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 KIAA1644Q3SXP7 199 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 COX19Q49B96 90 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 ZNF664Q8N3J9 261 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 MAP1LC3AQ9H492 121 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 UBE2D4Q9Y2X8 147 aa14.96□□□□□ -0.01
LSM7-204ENST00000587502 LOC389332A0A1B0GUA5 103 aa14.95□□□□□ -0.02
LSM7-204ENST00000587502 XCL1P47992 114 aa14.95□□□□□ -0.02
LSM7-204ENST00000587502 CIRBPQ14011 172 aaKnown RBP14.95□□□□□ -0.02
LSM7-204ENST00000587502 TMEM18Q96B42 140 aa14.95□□□□□ -0.02
LSM7-204ENST00000587502 CSDC2Q9Y534 153 aaKnown RBP14.95□□□□□ -0.02
LSM7-204ENST00000587502 GVQW2A0A096LPI5 108 aaPredicted RBP14.94□□□□□ -0.02
LSM7-204ENST00000587502 J3QL48 77 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 CCL25O15444 150 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 HIGD2BQ4VC39 106 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 Q8N8P6 123 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 DPH3Q96FX2 82 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 TIMM21Q9BVV7 248 aa14.93□□□□□ -0.02
LSM7-204ENST00000587502 TGIF2-C20orf24A0A0A6YYL0 155 aa14.92□□□□□ -0.02
LSM7-204ENST00000587502 RAB5AP20339 215 aa14.92□□□□□ -0.02
LSM7-204ENST00000587502 KRTAP10-4P60372 401 aaPredicted RBP14.92□□□□□ -0.02
LSM7-204ENST00000587502 RPL37AP61513 92 aaKnown RBP14.92□□□□□ -0.02
LSM7-204ENST00000587502 RPL39P62891 51 aaKnown RBP14.92□□□□□ -0.02
LSM7-204ENST00000587502 IGHV1-58A0A0C4DH39 117 aa14.91□□□□□ -0.02
LSM7-204ENST00000587502 PANO1I0J062 215 aa14.91□□□□□ -0.02
LSM7-204ENST00000587502 MT-ND6P03923 174 aa14.91□□□□□ -0.02
LSM7-204ENST00000587502 CD164L2Q6UWJ8 174 aa14.91□□□□□ -0.02
LSM7-204ENST00000587502 KRTAP29-1A8MX34 341 aaPredicted RBP14.9□□□□□ -0.02
LSM7-204ENST00000587502 C1orf196B1AJZ1 125 aa14.89□□□□□ -0.03
LSM7-204ENST00000587502 MRPL18Q9H0U6 180 aaKnown RBP14.89□□□□□ -0.03
LSM7-204ENST00000587502 PKIGQ9Y2B9 76 aa14.89□□□□□ -0.03
LSM7-204ENST00000587502 SPACA4Q8TDM5 124 aa14.88□□□□□ -0.03
LSM7-204ENST00000587502 FAM104AQ969W3 186 aa14.88□□□□□ -0.03
LSM7-204ENST00000587502 YPEL4Q96NS1 127 aa14.88□□□□□ -0.03
LSM7-204ENST00000587502 ALKBH7Q9BT30 221 aaPredicted RBP14.88□□□□□ -0.03
LSM7-204ENST00000587502 NXT2Q9NPJ8 142 aaKnown RBP14.88□□□□□ -0.03
LSM7-204ENST00000587502 IFI27P40305 119 aaPredicted RBP14.87□□□□□ -0.03
LSM7-204ENST00000587502 FABP9Q0Z7S8 132 aa14.87□□□□□ -0.03
LSM7-204ENST00000587502 Q6ZUT4 128 aa14.87□□□□□ -0.03
LSM7-204ENST00000587502 SPANXA1Q9NS26 97 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms