RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
TPM4-206ENST00000587201 A0A1B0GW15 77 aa11.37□□□□□ -0.59
TPM4-206ENST00000587201 SLPIP03973 132 aa11.37□□□□□ -0.59
TPM4-206ENST00000587201 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
TPM4-206ENST00000587201 PPP1R2P9O14990 202 aa11.36□□□□□ -0.59
TPM4-206ENST00000587201 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
TPM4-206ENST00000587201 MRPL54Q6P161 138 aaKnown RBP11.36□□□□□ -0.59
TPM4-206ENST00000587201 MRPL52Q86TS9 123 aaKnown RBP11.36□□□□□ -0.59
TPM4-206ENST00000587201 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
TPM4-206ENST00000587201 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 LINC00862A6NCI5 91 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 PANO1I0J062 215 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 CCL25O15444 150 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 CKS2P33552 79 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 XCL1P47992 114 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 FOXI1Q12951 378 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
TPM4-206ENST00000587201 S100A8P05109 93 aa11.34□□□□□ -0.59
TPM4-206ENST00000587201 HBBP68871 147 aa11.34□□□□□ -0.59
TPM4-206ENST00000587201 SS18Q15532 418 aa11.34□□□□□ -0.59
TPM4-206ENST00000587201 ZNF664Q8N3J9 261 aa11.34□□□□□ -0.59
TPM4-206ENST00000587201 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
TPM4-206ENST00000587201 F8W036 122 aa11.33□□□□□ -0.6
TPM4-206ENST00000587201 RAB14P61106 215 aa11.33□□□□□ -0.6
TPM4-206ENST00000587201 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
TPM4-206ENST00000587201 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
TPM4-206ENST00000587201 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
TPM4-206ENST00000587201 HERC1Q15751 4861 aa11.32□□□□□ -0.6
TPM4-206ENST00000587201 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
TPM4-206ENST00000587201 A0A1B0GXF2 115 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 D6R8Y8 96 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 TNFRSF6BO95407 300 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 KRTAP10-4P60372 401 aaPredicted RBP11.31□□□□□ -0.6
TPM4-206ENST00000587201 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
TPM4-206ENST00000587201 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
TPM4-206ENST00000587201 J3QL48 77 aa11.3□□□□□ -0.6
TPM4-206ENST00000587201 CIRBPQ14011 172 aaKnown RBP11.3□□□□□ -0.6
TPM4-206ENST00000587201 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
TPM4-206ENST00000587201 IGHV1-58A0A0C4DH39 117 aa11.29□□□□□ -0.6
TPM4-206ENST00000587201 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
TPM4-206ENST00000587201 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
TPM4-206ENST00000587201 CD164L2Q6UWJ8 174 aa11.29□□□□□ -0.6
TPM4-206ENST00000587201 TCAPO15273 167 aa11.28□□□□□ -0.6
TPM4-206ENST00000587201 COX6A2Q02221 97 aa11.28□□□□□ -0.6
TPM4-206ENST00000587201 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
TPM4-206ENST00000587201 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
TPM4-206ENST00000587201 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
TPM4-206ENST00000587201 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
TPM4-206ENST00000587201 A0A087WYN8 130 aa11.27□□□□□ -0.61
TPM4-206ENST00000587201 NPYP01303 97 aa11.27□□□□□ -0.61
TPM4-206ENST00000587201 PPBPP02775 128 aa11.27□□□□□ -0.61
TPM4-206ENST00000587201 SPACA4Q8TDM5 124 aa11.27□□□□□ -0.61
TPM4-206ENST00000587201 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 PHOX2AO14813 284 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 Q6ZUT4 128 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
TPM4-206ENST00000587201 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
TPM4-206ENST00000587201 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
TPM4-206ENST00000587201 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
TPM4-206ENST00000587201 MT-ND4LP03901 98 aa11.25□□□□□ -0.61
TPM4-206ENST00000587201 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
TPM4-206ENST00000587201 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
TPM4-206ENST00000587201 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
TPM4-206ENST00000587201 MALP21145 153 aa11.24□□□□□ -0.61
TPM4-206ENST00000587201 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
TPM4-206ENST00000587201 COX7A2LO14548 114 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 IFITM2Q01629 132 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 CLLU1Q5K131 121 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 CARD19Q96LW7 228 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
TPM4-206ENST00000587201 PLAC8Q9NZF1 115 aa11.22□□□□□ -0.61
TPM4-206ENST00000587201 RAB5AP20339 215 aa11.21□□□□□ -0.61
TPM4-206ENST00000587201 SPANXA1Q9NS26 97 aa11.21□□□□□ -0.61
TPM4-206ENST00000587201 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
TPM4-206ENST00000587201 A0A096LNI7 61 aa11.2□□□□□ -0.62
TPM4-206ENST00000587201 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
TPM4-206ENST00000587201 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
TPM4-206ENST00000587201 IGLV4-69A0A075B6H9 119 aa11.19□□□□□ -0.62
TPM4-206ENST00000587201 HNRNPA3P51991 378 aaKnown RBP11.19□□□□□ -0.62
TPM4-206ENST00000587201 STPG4Q8N801 248 aa11.19□□□□□ -0.62
TPM4-206ENST00000587201 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
TPM4-206ENST00000587201 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 APOMO95445 188 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 OXTP01178 125 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
TPM4-206ENST00000587201 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 FAM104AQ969W3 186 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
TPM4-206ENST00000587201 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
TPM4-206ENST00000587201 PKHD1L1Q86WI1 4243 aa11.17□□□□□ -0.62
TPM4-206ENST00000587201 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
TPM4-206ENST00000587201 LINC00474Q9P2X8 69 aa11.17□□□□□ -0.62
TPM4-206ENST00000587201 IFITM10A6NMD0 228 aa11.16□□□□□ -0.62
TPM4-206ENST00000587201 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms