RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 HAMPP81172 84 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 CLLU1Q5K131 121 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 UQCC3Q6UW78 93 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 Q6ZSA8 131 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
LINC01140-208ENST00000587165 ORMDL3Q8N138 153 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 LINC00528Q8N1L1 170 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 DPH3Q96FX2 82 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
LINC01140-208ENST00000587165 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 A0A1B0GXF2 115 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 C1orf196B1AJZ1 125 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 J3QL48 77 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 TNFRSF6BO95407 300 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 APOMO95445 188 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 ESDP10768 282 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 S100PP25815 95 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 TMEM136Q6ZRR5 245 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 NRACQ8N912 160 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 PRELID3AQ96N28 172 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 KRTAP4-5Q9BYR2 181 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 FAM30AQ9NZY2 134 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 LAMTOR2Q9Y2Q5 125 aa3.33□□□□□ -1.88
LINC01140-208ENST00000587165 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
LINC01140-208ENST00000587165 RYR1P21817 5038 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 PKD1P98161 4303 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
LINC01140-208ENST00000587165 GVQW2A0A096LPI5 108 aaPredicted RBP3.32□□□□□ -1.88
LINC01140-208ENST00000587165 TRAV13-1A0A0B4J241 112 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 ZNF561-AS1K7EIQ3 104 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 COX7A2LO14548 114 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 KRTAP26-1Q6PEX3 210 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 CTDSP1Q9GZU7 261 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 MAP1LC3AQ9H492 121 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 LINC00474Q9P2X8 69 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 LRP1BQ9NZR2 4599 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 DNAH5Q8TE73 4624 aa3.32□□□□□ -1.88
LINC01140-208ENST00000587165 TRAV9-1A0A075B6T8 112 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 IFITM10A6NMD0 228 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 NPYP01303 97 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 G0S2P27469 103 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 IFI27P40305 119 aaPredicted RBP3.31□□□□□ -1.88
LINC01140-208ENST00000587165 FOXI1Q12951 378 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 Q6ZN92 141 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 C15orf56Q8N910 161 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 CARD19Q96LW7 228 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 IMMP2LQ96T52 175 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 UBE2D4Q9Y2X8 147 aa3.31□□□□□ -1.88
LINC01140-208ENST00000587165 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 TMEM218A2RU14 115 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 K7EMI3 77 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
LINC01140-208ENST00000587165 MRPS36P82909 103 aaKnown RBP3.3□□□□□ -1.88
LINC01140-208ENST00000587165 NDUFA5Q16718 116 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 COX19Q49B96 90 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 ORMDL2Q53FV1 153 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 PAPPA-AS1Q5QFB9 102 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 SDIM1Q6ZPB5 146 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 Q6ZUT4 128 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 COMMD7Q86VX2 200 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 SEC11CQ9BY50 192 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
LINC01140-208ENST00000587165 CYSLTR1Q9Y271 337 aa3.3□□□□□ -1.88
LINC01140-208ENST00000587165 IGKV2-24A0A0C4DH68 120 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 LOC389332A0A1B0GUA5 103 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 RPL39P62891 51 aaKnown RBP3.29□□□□□ -1.88
LINC01140-208ENST00000587165 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 SYCNQ0VAF6 134 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 MAJINQ3KP22 176 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
LINC01140-208ENST00000587165 TEX43Q6ZNM6 134 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 Q8N8P6 123 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 OR10D4PQ8NGN7 298 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.29□□□□□ -1.88
LINC01140-208ENST00000587165 HSPG2P98160 4391 aa3.29□□□□□ -1.88
LINC01140-208ENST00000587165 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 A0A087WYN8 130 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms